Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_N20
         (539 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2543|AAF48712.2|  237|Drosophila melanogaster CG12997-P...    28   7.1  
X78349-1|CAA55144.1|  686|Drosophila melanogaster Grd protein.         28   9.4  
AY069142-1|AAL39287.1|  482|Drosophila melanogaster GH15861p pro...    28   9.4  
AE014296-2969|AAF49298.2|  686|Drosophila melanogaster CG7446-PA...    28   9.4  
AE013599-461|AAM71102.1|  482|Drosophila melanogaster CG1358-PC,...    28   9.4  
AE013599-460|AAM71101.1|  482|Drosophila melanogaster CG1358-PB,...    28   9.4  
AE013599-459|AAF59224.1|  482|Drosophila melanogaster CG1358-PA,...    28   9.4  

>AE014298-2543|AAF48712.2|  237|Drosophila melanogaster CG12997-PA
           protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 531 AIFFPQGQNAKSIPLAPPPPG 469
           A+FFP G + +  PL PPPPG
Sbjct: 3   AVFFP-GSDYQLQPLPPPPPG 22


>X78349-1|CAA55144.1|  686|Drosophila melanogaster Grd protein.
          Length = 686

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 163 VLLLVCLAMFVRESNARPPWLAPGSGVFTESAE 261
           +L+  CL M     NA P  + PGSG F+ SA+
Sbjct: 41  LLISCCLLMLCIYPNAWPWSIGPGSGPFSVSAD 73


>AY069142-1|AAL39287.1|  482|Drosophila melanogaster GH15861p
           protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 166 LLLVCLAMFVRESNARPPWLAPGSGVFTESAECHTDVSIYFLYRLMSTKGFTRVFLLPS 342
           +LLV + +F ++    PP  A  +    ES+E      +  L  LM+ + F  +FLL S
Sbjct: 235 ILLVLMVIFFQDKPPTPPSAAQEAAQLLESSEAEQVSFMQSLKNLMTNRNF--IFLLLS 291


>AE014296-2969|AAF49298.2|  686|Drosophila melanogaster CG7446-PA
           protein.
          Length = 686

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 163 VLLLVCLAMFVRESNARPPWLAPGSGVFTESAE 261
           +L+  CL M     NA P  + PGSG F+ SA+
Sbjct: 41  LLISCCLLMLCIYPNAWPWSIGPGSGPFSVSAD 73


>AE013599-461|AAM71102.1|  482|Drosophila melanogaster CG1358-PC,
           isoform C protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 166 LLLVCLAMFVRESNARPPWLAPGSGVFTESAECHTDVSIYFLYRLMSTKGFTRVFLLPS 342
           +LLV + +F ++    PP  A  +    ES+E      +  L  LM+ + F  +FLL S
Sbjct: 235 ILLVLMVIFFQDKPPTPPSAAQEAAQLLESSEAEQVSFMQSLKNLMTNRNF--IFLLLS 291


>AE013599-460|AAM71101.1|  482|Drosophila melanogaster CG1358-PB,
           isoform B protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 166 LLLVCLAMFVRESNARPPWLAPGSGVFTESAECHTDVSIYFLYRLMSTKGFTRVFLLPS 342
           +LLV + +F ++    PP  A  +    ES+E      +  L  LM+ + F  +FLL S
Sbjct: 235 ILLVLMVIFFQDKPPTPPSAAQEAAQLLESSEAEQVSFMQSLKNLMTNRNF--IFLLLS 291


>AE013599-459|AAF59224.1|  482|Drosophila melanogaster CG1358-PA,
           isoform A protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 166 LLLVCLAMFVRESNARPPWLAPGSGVFTESAECHTDVSIYFLYRLMSTKGFTRVFLLPS 342
           +LLV + +F ++    PP  A  +    ES+E      +  L  LM+ + F  +FLL S
Sbjct: 235 ILLVLMVIFFQDKPPTPPSAAQEAAQLLESSEAEQVSFMQSLKNLMTNRNF--IFLLLS 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,233,820
Number of Sequences: 53049
Number of extensions: 509254
Number of successful extensions: 1650
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)