Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_N20
(539 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.37
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.37
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.0
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 2.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.0
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 22 4.6
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 22 4.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 4.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 4.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 4.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 4.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 4.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 4.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 4.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 4.6
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 22 4.6
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 22 4.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.1
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.4 bits (53), Expect = 0.37
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = -2
Query: 340 RAKEIRE*SPW*TLVYIKNIYLHLYDIQLIL*RPRYRVQATEVS 209
R+ + + +PW +K +++H+ L++ RP+Y+ + S
Sbjct: 334 RSPQTHKMAPW-----VKRVFIHILPRLLVMRRPQYKFETNRYS 372
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.4 bits (53), Expect = 0.37
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = -2
Query: 340 RAKEIRE*SPW*TLVYIKNIYLHLYDIQLIL*RPRYRVQATEVS 209
R+ + + +PW +K +++H+ L++ RP+Y+ + S
Sbjct: 334 RSPQTHKMAPW-----VKRVFIHILPRLLVMRRPQYKFETNRYS 372
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = -1
Query: 260 SADSVKTPLPGASHGGLAFDSRTNIARQTSSNTEVAEFFAEKKITDIF 117
S D +TP F S +N + + N + AEKK + F
Sbjct: 412 SRDPARTPFQWDDSVSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSF 459
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 23.0 bits (47), Expect = 2.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 70 PSEFIVFDYLKNLVVKKMSVIFFSAKNSAT 159
PS+ +VFD + ++K++ + A NS T
Sbjct: 151 PSQIVVFDLKNSKLLKQVKIPHDIAINSTT 180
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = -1
Query: 260 SADSVKTPLPGASHGGLAFDSRTNIARQTSSNTEVAEFFAEKKITDIF 117
S D +TP F S +N + + N + AEKK + F
Sbjct: 412 SRDPARTPFQWDDSVSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSF 459
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 311 LVDISLYKKYILTSV*HSADSVKTPLP 231
++D+ + ILT+V ADS T LP
Sbjct: 113 VIDVRPQNETILTTVSSEADSDVTTLP 139
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 311 LVDISLYKKYILTSV*HSADSVKTPLP 231
++D+ + ILT+V ADS T LP
Sbjct: 161 VIDVRPQNETILTTVSSEADSDVTTLP 187
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 523 LPSRAKCKIDPSRPPSPWI 467
+P C PSRP PW+
Sbjct: 123 VPVPIYCGNFPSRPMGPWV 141
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 523 LPSRAKCKIDPSRPPSPWI 467
+P C PSRP PW+
Sbjct: 123 VPVPIYCGNFPSRPMGPWV 141
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 523 LPSRAKCKIDPSRPPSPWI 467
+P C PSRP PW+
Sbjct: 123 VPVPIYCGNFPSRPMGPWV 141
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 523 LPSRAKCKIDPSRPPSPWI 467
+P C PSRP PW+
Sbjct: 123 VPVPIYCGNFPSRPMGPWV 141
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 523 LPSRAKCKIDPSRPPSPWI 467
+P C PSRP PW+
Sbjct: 123 VPVPIYCGNFPSRPMGPWV 141
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 523 LPSRAKCKIDPSRPPSPWI 467
+P C PSRP PW+
Sbjct: 123 VPVPIYCGNFPSRPMGPWV 141
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 523 LPSRAKCKIDPSRPPSPWI 467
+P C PSRP PW+
Sbjct: 123 VPVPIYCGNFPSRPMGPWV 141
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 523 LPSRAKCKIDPSRPPSPWI 467
+P C PSRP PW+
Sbjct: 126 VPVPIYCGNFPSRPMGPWV 144
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 311 LVDISLYKKYILTSV*HSADSVKTPLP 231
++D+ + ILT+V ADS T LP
Sbjct: 161 VIDVRPQNETILTTVSSEADSDVTTLP 187
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 311 LVDISLYKKYILTSV*HSADSVKTPLP 231
++D+ + ILT+V ADS T LP
Sbjct: 161 VIDVRPQNETILTTVSSEADSDVTTLP 187
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 6.1
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 308 PRASLAYFFCPQKLSNYIL*NVK*IPTVNGNCVSNIDLRIFVFNCSQLCHCIRNPGGGGA 487
P + + ++LSN V TVNG+ VS++++ N L CI G A
Sbjct: 421 PTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIAASKVGSA 480
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 417 TYEFSFLIVHNYAIAYVIQG 476
TY+ S ++ HN + YV G
Sbjct: 86 TYQTSVVVTHNGSCLYVPPG 105
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 486 APPPPGLRMQWHNCEQL 436
AP PP L Q +C+QL
Sbjct: 1108 APLPPALPPQVVSCQQL 1124
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,632
Number of Sequences: 438
Number of extensions: 3517
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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