Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_N16
(430 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68117-1|CAA92181.2| 459|Caenorhabditis elegans Hypothetical pr... 107 4e-24
Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical pr... 39 0.001
Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical pr... 39 0.001
AF068709-17|AAC19257.2| 287|Caenorhabditis elegans Serpentine r... 28 2.5
Z78540-3|CAB01735.2| 482|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF078157-9|AAG24075.3| 425|Caenorhabditis elegans Hypothetical ... 27 7.5
Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical p... 26 10.0
AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin monoox... 26 10.0
>Z68117-1|CAA92181.2| 459|Caenorhabditis elegans Hypothetical
protein F45E6.3 protein.
Length = 459
Score = 107 bits (256), Expect = 4e-24
Identities = 57/122 (46%), Positives = 75/122 (61%), Gaps = 11/122 (9%)
Frame = +1
Query: 19 ININKLRKLAFNGIPDDKGLRSMVWKILLHYLPKEKKAHETTLIKKRQLYKQFIDEIIVS 198
I+IN+LR G+P+ LR + W++LLHYLP E+ +T L ++R Y Q I++IIV
Sbjct: 23 IDINELRAGCSYGVPES--LRPLAWRLLLHYLPLERHKWQTFLAEQRDNYDQMIEQIIVE 80
Query: 199 PGGPS-----------DHPLNLSPDSSWSNFFKDNEVLLQIDHDVRRLCPDISFFQSATE 345
PG S DHPL+ P S W FF+DN+VL QID DVRRL P+I FFQ +
Sbjct: 81 PGTASLQQSAAQNQDNDHPLSDHPTSDWQAFFQDNKVLSQIDKDVRRLYPEIQFFQLLSR 140
Query: 346 FP 351
FP
Sbjct: 141 FP 142
>Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical
protein B0393.2 protein.
Length = 585
Score = 58.0 bits (134), Expect = 3e-09
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Frame = +1
Query: 34 LRKLAFNGIPDDKGLRSMVWKILLHYLPKEKKAHETTLIKKRQLYKQFIDEIIVSPGGPS 213
L ++A +G RS VW+++L LP E E +L + R LY+ + ++ P
Sbjct: 31 LARVAASGSLRSSSCRSAVWRLVLRCLPYETSDWEISLSRSRNLYRAHKENHLIDPHDTK 90
Query: 214 -------DHPLNLSPDSSWSNFFKDNEVLLQIDHDVRRLCPDISFFQSAT 342
++PL + W+ FF+DN++ I DV R P+I FFQ+ +
Sbjct: 91 FSQDPEFNNPLASIEQNPWNTFFEDNDLRDIIGKDVSRTFPEIEFFQNTS 140
>Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical
protein F32B6.8b protein.
Length = 495
Score = 39.1 bits (87), Expect = 0.001
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +1
Query: 19 ININKLRKLAFNGIPDDKGLRSMVWKILLHYLPKEKKAHETTLIKKRQLYKQFIDEIIVS 198
+++ KLR+ + GIP LR W++L YLP + E TL KR Y ++++
Sbjct: 181 VDLEKLREDCWMGIPHK--LRPQAWRLLSGYLPTNAERREVTLQCKRDEYWHYVEQYF-- 236
Query: 199 PGGPSDHPLNLSPDSSWSNFFKDN-EVLLQIDHDVRRLCPDISFFQ 333
H S F N + QI+ D+ R+CP I FQ
Sbjct: 237 ------H----------SRFDDQNADTFRQINIDIPRMCPLIPLFQ 266
>Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical
protein F32B6.8a protein.
Length = 475
Score = 39.1 bits (87), Expect = 0.001
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +1
Query: 19 ININKLRKLAFNGIPDDKGLRSMVWKILLHYLPKEKKAHETTLIKKRQLYKQFIDEIIVS 198
+++ KLR+ + GIP LR W++L YLP + E TL KR Y ++++
Sbjct: 161 VDLEKLREDCWMGIPHK--LRPQAWRLLSGYLPTNAERREVTLQCKRDEYWHYVEQYF-- 216
Query: 199 PGGPSDHPLNLSPDSSWSNFFKDN-EVLLQIDHDVRRLCPDISFFQ 333
H S F N + QI+ D+ R+CP I FQ
Sbjct: 217 ------H----------SRFDDQNADTFRQINIDIPRMCPLIPLFQ 246
>AF068709-17|AAC19257.2| 287|Caenorhabditis elegans Serpentine
receptor, class x protein24 protein.
Length = 287
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 175 IVYTTVFSL*ELSHVLSFLWANSVIKSSKPLNVVLYHLEF 56
+ Y +F + + L+FLWA S+I + V HLE+
Sbjct: 109 LYYAPIFCVTKTKFYLTFLWAVSIIGCTAIYEVANCHLEY 148
>Z78540-3|CAB01735.2| 482|Caenorhabditis elegans Hypothetical
protein C33G3.5 protein.
Length = 482
Score = 27.5 bits (58), Expect = 4.3
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 DVININK-LRKLAFNGIPDDKGLRSMVWKILLHYLPKEKKAHETTLIKKRQLYKQFIDEI 189
D + +NK L+ +AF PDDK R MV + +K E+ I ++ + F+ ++
Sbjct: 213 DTLELNKKLQNIAFFDRPDDKEFREMVDLL-------QKVFGESMNITEKGIKVPFVPDV 265
Query: 190 IVSPGGPSDHPLNLSPDSSWSN 255
V S+ + D+ WS+
Sbjct: 266 TVRNSSSSEEEI----DTEWSS 283
>Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical
protein T05E11.6 protein.
Length = 319
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 178 IDEIIVSPGGPSDHPLNLSPDSSWSNFFKDNEVLLQIDHDVRRL-CPDISFFQS-ATEFP 351
IDE+ +PG ++ + + W N+ + V L + H ++RL PD + A + P
Sbjct: 26 IDELFDTPGHTNNWAVLVCTSKFWFNYRHVSNV-LALYHSIKRLGIPDSNIIMMLAEDVP 84
Query: 352 CD 357
C+
Sbjct: 85 CN 86
>Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical
protein F52H3.1 protein.
Length = 730
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 277 LLQIDHDVRRLCPDISFFQSATEFPCDEIVNQ 372
+++ +H V + CPD+ F +E C+E++ +
Sbjct: 543 IMEPEHVVDQACPDVYDFPLMSERFCEELIEE 574
>AF078157-9|AAG24075.3| 425|Caenorhabditis elegans Hypothetical
protein F25E5.4 protein.
Length = 425
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 98 IFQTIERSPLSSGIPLKASFLNLLMLMTSSPR 3
+ QT R PLS K L+L L+ SPR
Sbjct: 371 LLQTCPREPLSKNFSQKNQSLHLTQLLLPSPR 402
>Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical
protein F53F4.5 protein.
Length = 568
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 250 SNFFKDNEVLLQIDHDVRRLCPDISFFQ 333
+N F + + ++DHDV L PD FFQ
Sbjct: 241 ANDFMEYRLQQRMDHDVYGLRPDHRFFQ 268
>AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 568
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 250 SNFFKDNEVLLQIDHDVRRLCPDISFFQ 333
+N F + + ++DHDV L PD FFQ
Sbjct: 241 ANDFMEYRLQQRMDHDVYGLRPDHRFFQ 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,354,463
Number of Sequences: 27780
Number of extensions: 211530
Number of successful extensions: 600
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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