Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_N08
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 64 5e-11
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC084268-3|AAK19005.5| 397|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical p... 40 0.002
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 40 0.002
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 38 0.006
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 37 0.008
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 36 0.019
AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical ... 36 0.025
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 33 0.10
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 32 0.31
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 31 0.71
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 31 0.71
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 31 0.71
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 31 0.71
U41013-3|AAA82302.1| 433|Caenorhabditis elegans Protein kinase ... 27 6.6
Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical pr... 27 8.7
U10438-12|ABB88244.1| 325|Caenorhabditis elegans Hypothetical p... 27 8.7
U10438-11|AAL50321.1| 335|Caenorhabditis elegans Hypothetical p... 27 8.7
AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical ... 27 8.7
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 64.5 bits (150), Expect = 5e-11
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Frame = +3
Query: 12 IVAEMSSVLRGNAHIE-GLFRKAGSQARQKDIKKLLDAGGCVSEGHH----PIDVASVLK 176
++ + LR N E G+FR +G+ ++ K I+ LDAG ++ H P VAS LK
Sbjct: 257 VLTKCCDFLRQNGMNERGIFRVSGNASKIKRIRAALDAGQFDADEKHYNNDPHAVASTLK 316
Query: 177 LYLRCLPEPLISAEVQELLLRCRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYIA 356
YLR LP+PL +Q + G++ I Y+M+ L +
Sbjct: 317 AYLRELPDPLTMDSLQSDWVEAINLEGEERFSAIDRCLKKMTRGHRQNLIYLMKFLCDLE 376
Query: 357 TKHRENLMDSSNLAIVMAPSI 419
K E M++SNLAIV AP++
Sbjct: 377 AKREETSMNASNLAIVFAPTM 397
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 58.0 bits (134), Expect = 4e-09
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Frame = +3
Query: 9 MIVAEMSSVLRGNAHIEGLFRKAGSQARQKDIKKLLDAGGCVSE----GHHPIDVASVLK 176
+I + + R +G++R G +++ ++I + E +P+++ASV+K
Sbjct: 195 IIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFERSSSDDEVCLDNENPMNLASVVK 254
Query: 177 LYLRCLPEPLISAEVQELLLR-----CRLTAG-----DDAIKPIXXXXXXXXXXXXXXXX 326
LYLR LPEPL++ E+ + +R C A ++ ++ +
Sbjct: 255 LYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCEEERVEQLRQLARKLPVHNYETLK 314
Query: 327 YIMELLKYIATKHRENLMDSSNLAIVMAPSIMPLPAAASAQRLEHHVAL---------IK 479
+IM L ++ H NLM +SNL+ V+APS++ + S +R++H A+ I+
Sbjct: 315 FIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIWM----SPKRIDHTSAIMHTQYTNKAIE 370
Query: 480 LFIENSQHI 506
+ I NS HI
Sbjct: 371 VMIRNSYHI 379
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 58.0 bits (134), Expect = 4e-09
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Frame = +3
Query: 9 MIVAEMSSVLRGNAHIEGLFRKAGSQARQKDIKKLLDAGGCVSE----GHHPIDVASVLK 176
+I + + R +G++R G +++ ++I + E +P+++ASV+K
Sbjct: 424 IIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFERSSSDDEVCLDNENPMNLASVVK 483
Query: 177 LYLRCLPEPLISAEVQELLLR-----CRLTAG-----DDAIKPIXXXXXXXXXXXXXXXX 326
LYLR LPEPL++ E+ + +R C A ++ ++ +
Sbjct: 484 LYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCEEERVEQLRQLARKLPVHNYETLK 543
Query: 327 YIMELLKYIATKHRENLMDSSNLAIVMAPSIMPLPAAASAQRLEHHVAL---------IK 479
+IM L ++ H NLM +SNL+ V+APS++ + S +R++H A+ I+
Sbjct: 544 FIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIWM----SPKRIDHTSAIMHTQYTNKAIE 599
Query: 480 LFIENSQHI 506
+ I NS HI
Sbjct: 600 VMIRNSYHI 608
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 58.0 bits (134), Expect = 4e-09
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Frame = +3
Query: 9 MIVAEMSSVLRGNAHIEGLFRKAGSQARQKDIKKLLDAGGCVSE----GHHPIDVASVLK 176
+I + + R +G++R G +++ ++I + E +P+++ASV+K
Sbjct: 195 IIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFERSSSDDEVCLDNENPMNLASVVK 254
Query: 177 LYLRCLPEPLISAEVQELLLR-----CRLTAG-----DDAIKPIXXXXXXXXXXXXXXXX 326
LYLR LPEPL++ E+ + +R C A ++ ++ +
Sbjct: 255 LYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCEEERVEQLRQLARKLPVHNYETLK 314
Query: 327 YIMELLKYIATKHRENLMDSSNLAIVMAPSIMPLPAAASAQRLEHHVAL---------IK 479
+IM L ++ H NLM +SNL+ V+APS++ + S +R++H A+ I+
Sbjct: 315 FIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIWM----SPKRIDHTSAIMHTQYTNKAIE 370
Query: 480 LFIENSQHI 506
+ I NS HI
Sbjct: 371 VMIRNSYHI 379
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 58.0 bits (134), Expect = 4e-09
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Frame = +3
Query: 9 MIVAEMSSVLRGNAHIEGLFRKAGSQARQKDIKKLLDAGGCVSE----GHHPIDVASVLK 176
+I + + R +G++R G +++ ++I + E +P+++ASV+K
Sbjct: 424 IIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFERSSSDDEVCLDNENPMNLASVVK 483
Query: 177 LYLRCLPEPLISAEVQELLLR-----CRLTAG-----DDAIKPIXXXXXXXXXXXXXXXX 326
LYLR LPEPL++ E+ + +R C A ++ ++ +
Sbjct: 484 LYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCEEERVEQLRQLARKLPVHNYETLK 543
Query: 327 YIMELLKYIATKHRENLMDSSNLAIVMAPSIMPLPAAASAQRLEHHVAL---------IK 479
+IM L ++ H NLM +SNL+ V+APS++ + S +R++H A+ I+
Sbjct: 544 FIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIWM----SPKRIDHTSAIMHTQYTNKAIE 599
Query: 480 LFIENSQHI 506
+ I NS HI
Sbjct: 600 VMIRNSYHI 608
>Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical
protein F47A4.3b protein.
Length = 742
Score = 49.6 bits (113), Expect = 1e-06
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 12/178 (6%)
Frame = +3
Query: 9 MIVAEMSSVLRGNAHIEGLFRKAGSQARQKDIKKLLDAGG---CVSEGHHPI-DVASVLK 176
+IV + + + + G++R+ G Q+ + ++ D+G G I V+S+LK
Sbjct: 278 VIVEKCCASIEDQGIVTGIYRQCGIQSNIQRLRAKFDSGAEPDLHEFGQRDIYSVSSLLK 337
Query: 177 LYLRCLPEPLISAEVQELLLRC--RLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKY 350
Y R LP PL + + L+ + + + ++ + ++ME L
Sbjct: 338 QYFRQLPNPLFTYQAYPKLIEAFEKEDSLSEKVESLRFSLETMPEAHYRTAKFLMEHLTR 397
Query: 351 IATKHRENLMDSSNLAIVMAPSIM-PLPAAASAQR-----LEHHVALIKLFIENSQHI 506
+ M S NLAIV +P++ P P A L H A+ FIENS+ +
Sbjct: 398 LCKSKSLTDMTSKNLAIVWSPNLFRPPPTLNGADTHLLSGLNVHTAICDFFIENSESL 455
>Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical
protein F47A4.3a protein.
Length = 759
Score = 49.6 bits (113), Expect = 1e-06
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 12/178 (6%)
Frame = +3
Query: 9 MIVAEMSSVLRGNAHIEGLFRKAGSQARQKDIKKLLDAGG---CVSEGHHPI-DVASVLK 176
+IV + + + + G++R+ G Q+ + ++ D+G G I V+S+LK
Sbjct: 295 VIVEKCCASIEDQGIVTGIYRQCGIQSNIQRLRAKFDSGAEPDLHEFGQRDIYSVSSLLK 354
Query: 177 LYLRCLPEPLISAEVQELLLRC--RLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKY 350
Y R LP PL + + L+ + + + ++ + ++ME L
Sbjct: 355 QYFRQLPNPLFTYQAYPKLIEAFEKEDSLSEKVESLRFSLETMPEAHYRTAKFLMEHLTR 414
Query: 351 IATKHRENLMDSSNLAIVMAPSIM-PLPAAASAQR-----LEHHVALIKLFIENSQHI 506
+ M S NLAIV +P++ P P A L H A+ FIENS+ +
Sbjct: 415 LCKSKSLTDMTSKNLAIVWSPNLFRPPPTLNGADTHLLSGLNVHTAICDFFIENSESL 472
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 48.8 bits (111), Expect = 2e-06
Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Frame = +3
Query: 9 MIVAEMSSVLRGNAHIEGLFRKAGSQARQKDIKKLLDAGG----CVSEGHHPIDVASVLK 176
++ + ++ + R + +GLFR +GSQ+ ++ + G + +G A VLK
Sbjct: 543 LVQSAIAYLSRYSLRNQGLFRVSGSQSEINRFREAYERGEDLFQYLDDGSDANSAAGVLK 602
Query: 177 LYLRCLPEPLISAEVQELLLRC-RLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYI 353
LY R L EP+ + E C + + + ++ ++ L ++
Sbjct: 603 LYFRELREPIFPIFMFEQFCDCAKSESPTEFVRRARELVSKLPVSHVLLLRFLFAFLSHL 662
Query: 354 ATKHRENLMDSSNLAIVMAPSIMPLP 431
EN+M+ NLAI P+++P+P
Sbjct: 663 CEFADENMMEPHNLAICFGPTLLPIP 688
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical protein
C01F4.2a protein.
Length = 986
Score = 48.8 bits (111), Expect = 2e-06
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Frame = +3
Query: 60 GLFRKAGSQARQKDIKKLLD--AGGCVS-----EGHHPIDVASVLKLYLRCLPEPLISAE 218
GLFR AG+ R + ++ L+ GG V E DVA++LK Y R LP+ L+ E
Sbjct: 548 GLFRVAGNTKRCRQLRNALEKVGGGAVINDNMVENTTSHDVATLLKEYFRDLPQSLLPGE 607
Query: 219 VQELLLRCRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYIA----TKHRE----- 371
+ D+ I+ I +++ L ++ +H E
Sbjct: 608 HYSAYIGAAKLNVDERIEAIRLLFALLVSPILDTLFVLLKFLHEVSCHSQDRHDEDGELL 667
Query: 372 --NLMDSSNLAIVMAPSIMPLPAAASAQRL---EHHVALIKLFIENSQHIGLLTEDLMMQ 536
N MD+ NLA + APSI+ + + L EH V +++ I N + I + ++L +
Sbjct: 668 SGNKMDARNLATIFAPSILRVDHDKLHETLAENEHQVIIVETMISNVEEIFKIPKELQCK 727
Query: 537 L 539
+
Sbjct: 728 I 728
>Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical
protein F45H7.2b protein.
Length = 722
Score = 48.0 bits (109), Expect = 4e-06
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Frame = +3
Query: 15 VAEMSSVLRGNA-HIEGLFRKAGSQARQKDIKKLLDA---------GGCVSEGHHPIDVA 164
+ E+ LR A G+FRK G ++R +++ ++++ G + + DVA
Sbjct: 287 ILEVMKFLRNIAPETVGIFRKNGVKSRIAELRSIIESYSGNTDVFVGENLLDSTQVHDVA 346
Query: 165 SVLKLYLRCLPEPLISAEVQELLLR-CRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMEL 341
+LK Y R LPEPL++ ++ E+ C + + I + ++
Sbjct: 347 DLLKQYFRDLPEPLMTVKMSEVFANICSVVPDVERITALQYAILLLPDENREALKTLLLF 406
Query: 342 LKYIATKHRENLMDSSNLAIVMAPSIMPLPAA 437
LK ++ + N M + NL++ PS+ L A+
Sbjct: 407 LKEVSRNSQVNNMTAQNLSVCFTPSLFQLGAS 438
>Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical
protein F45H7.2a protein.
Length = 842
Score = 48.0 bits (109), Expect = 4e-06
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Frame = +3
Query: 15 VAEMSSVLRGNA-HIEGLFRKAGSQARQKDIKKLLDA---------GGCVSEGHHPIDVA 164
+ E+ LR A G+FRK G ++R +++ ++++ G + + DVA
Sbjct: 407 ILEVMKFLRNIAPETVGIFRKNGVKSRIAELRSIIESYSGNTDVFVGENLLDSTQVHDVA 466
Query: 165 SVLKLYLRCLPEPLISAEVQELLLR-CRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMEL 341
+LK Y R LPEPL++ ++ E+ C + + I + ++
Sbjct: 467 DLLKQYFRDLPEPLMTVKMSEVFANICSVVPDVERITALQYAILLLPDENREALKTLLLF 526
Query: 342 LKYIATKHRENLMDSSNLAIVMAPSIMPLPAA 437
LK ++ + N M + NL++ PS+ L A+
Sbjct: 527 LKEVSRNSQVNNMTAQNLSVCFTPSLFQLGAS 558
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Frame = +3
Query: 57 EGLFRKAGSQARQKDIKKLLDAGGCVSEGH--HPIDVASVLKLYLRCLPEPLISAEVQEL 230
EG+FRK+ Q+ K++K LD G V + H + +AS+LK YLR +P ++ + EL
Sbjct: 282 EGIFRKSPKQSTFKELKCELDK-GVVPDFHKYNTHVLASILKEYLRSIPGKILLSGNYEL 340
Query: 231 LLRCRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYI--ATKHRENLMDSSNLAIV 404
+R + + K + + +LK + + + M++S+L++
Sbjct: 341 WMR-EIADEPNTEKKVSCCRALLSHLPTSHSILLANVLKLLNKISNSPSSKMNASSLSVC 399
Query: 405 MAPSIMPLP 431
+APS + P
Sbjct: 400 LAPSFLESP 408
>AC084268-3|AAK19005.5| 397|Caenorhabditis elegans Hypothetical
protein Y92H12BL.4 protein.
Length = 397
Score = 42.7 bits (96), Expect = 2e-04
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Frame = +3
Query: 42 GNAHIEGLFRKAGSQARQKDIKKLLDAGGCVSEGHHPIDV-ASVLKLYLRCLPEPLISAE 218
G EGLFR AG + + LD G ++ H +V A +LKL+LR LP PLI
Sbjct: 250 GGRRTEGLFRVAGDPEQLATARGQLD--GWLAPKMHDANVPAGLLKLWLRQLPVPLILPT 307
Query: 219 V-QELLLRCRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYIATKHRENLMDSSNL 395
+ Q L+ A +AI+ + + +L + + MD+SNL
Sbjct: 308 LYQRALVAAENPA--EAIRLVDLLPEINRLVLVRVIALLQDLSREEVVAKTK--MDTSNL 363
Query: 396 AIVMAPSIM 422
A+V+AP+I+
Sbjct: 364 AMVIAPNIL 372
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 40.7 bits (91), Expect = 7e-04
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Frame = +3
Query: 42 GNAHIEGLFRKAGSQARQKDI-KKLLDAGGC-VSEGHHPIDV-ASVLKLYLRCLPEPLIS 212
G EGL+R G+Q ++ K+ L G VS P+ V A+ LK + CLPE LI
Sbjct: 1176 GGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAATALKSFFSCLPESLIP 1235
Query: 213 AEVQELLLRCRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYI--ATKHRENLMDS 386
L + + DD IK I + L+ ++ + + +M+S
Sbjct: 1236 T-AYHLRWKQIMMVSDD-IKKIDGIRDALAILPVSNQKVLQYLVTHLTKVSCSPKTVMNS 1293
Query: 387 SNLAIVMAPSIMPLPAAASAQRLEHHVALIKLFIE 491
+NL+ V P++ P AS + L + +L +E
Sbjct: 1294 NNLSKVWTPTLF-RPVFASYEELSSGIIAFQLALE 1327
>U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical
protein T04C9.1c protein.
Length = 475
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Frame = +3
Query: 51 HIEGLFRKAGSQAR-QK------DIKKLLDAGGCV--SEGHHPIDVASVLKLYLRCLPEP 203
H +G++R G ++ QK D +K + GG + ++S +K +LR LPEP
Sbjct: 86 HEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDDEWETKTISSAVKTFLRNLPEP 145
Query: 204 LISAEVQELLLR-CRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYIATKHRENLM 380
L++ E+ + + ++ I I ++ LK +A ENLM
Sbjct: 146 LMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLRMLEIVVRHLKRVADLSNENLM 205
Query: 381 DSSNLAIVMAPSIM 422
SNL + P+++
Sbjct: 206 TVSNLGVCFGPTLL 219
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Frame = +3
Query: 51 HIEGLFRKAGSQAR-QK------DIKKLLDAGGCV--SEGHHPIDVASVLKLYLRCLPEP 203
H +G++R G ++ QK D +K + GG + ++S +K +LR LPEP
Sbjct: 426 HEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDDEWETKTISSAVKTFLRNLPEP 485
Query: 204 LISAEVQELLLR-CRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYIATKHRENLM 380
L++ E+ + + ++ I I ++ LK +A ENLM
Sbjct: 486 LMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLRMLEIVVRHLKRVADLSNENLM 545
Query: 381 DSSNLAIVMAPSIM 422
SNL + P+++
Sbjct: 546 TVSNLGVCFGPTLL 559
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Frame = +3
Query: 51 HIEGLFRKAGSQAR-QK------DIKKLLDAGGCV--SEGHHPIDVASVLKLYLRCLPEP 203
H +G++R G ++ QK D +K + GG + ++S +K +LR LPEP
Sbjct: 426 HEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDDEWETKTISSAVKTFLRNLPEP 485
Query: 204 LISAEVQELLLR-CRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYIATKHRENLM 380
L++ E+ + + ++ I I ++ LK +A ENLM
Sbjct: 486 LMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLRMLEIVVRHLKRVADLSNENLM 545
Query: 381 DSSNLAIVMAPSIM 422
SNL + P+++
Sbjct: 546 TVSNLGVCFGPTLL 559
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Frame = +3
Query: 54 IEGLFRKAGSQARQKDIKKLL----DAGGCVSEGHHPIDVASVLKLYLRCLPEPLISAEV 221
+EG++RK+GS + + I+K++ DA E + +++K + R L EP+I ++
Sbjct: 1579 VEGVYRKSGSLPQVRSIRKVIESTADADSVNLEDIGVHVLTTLVKAFFRELAEPIIIFDL 1638
Query: 222 QELLLR-CRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYIATKHRENLMDSSNLA 398
E L + + ++ + +M L +A + N M +NLA
Sbjct: 1639 YENFLNVSEVEDMGERVRCLSVMIELLPKPNRAVLDRLMYHLARVADQEAVNKMGCNNLA 1698
Query: 399 IVMAPSIMPLPAAASAQRLEHHVA 470
++ P ++ +A AQ + VA
Sbjct: 1699 LIFGPCVLRRQDSAHAQEQLNDVA 1722
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 159 VASVLKLYLRCLPEPLISAEVQELLLRC-RLTAGDDAIKPIXXXXXXXXXXXXXXXXYIM 335
V+S+LK++LR LPEPL++ ++ + R++ + + + +++
Sbjct: 860 VSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKLRNLLRKLPRPHYDTLRFLI 919
Query: 336 ELLKYIATKHRE-NLMDSSNLAIVMAPSIM 422
L I TKH + N M+ NLA++ PSI+
Sbjct: 920 VHLSEI-TKHSDVNKMECRNLALMFGPSIV 948
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical protein
C04D8.1 protein.
Length = 1317
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 159 VASVLKLYLRCLPEPLISAEVQELLLRC-RLTAGDDAIKPIXXXXXXXXXXXXXXXXYIM 335
V+S+LK++LR LPEPL++ ++ + R++ + + + +++
Sbjct: 738 VSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKLRNLLRKLPRPHYDTLRFLI 797
Query: 336 ELLKYIATKHRE-NLMDSSNLAIVMAPSIM 422
L I TKH + N M+ NLA++ PSI+
Sbjct: 798 VHLSEI-TKHSDVNKMECRNLALMFGPSIV 826
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 37.1 bits (82), Expect = 0.008
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 19/157 (12%)
Frame = +3
Query: 6 RMIVAEMSSVLRGNAHIEGLFRKAGSQAR--QKDIKKLLDAGGCVSEGHHPIDVASVLKL 179
+ IV + + + +G+FRK G+ R + +++ + + + IDV +++K
Sbjct: 67 KFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMVKR 126
Query: 180 YLRCLPEPLI-SAEVQELLLR--CRLTAGDDAI--------------KPIXXXXXXXXXX 308
+LR L PL+ S E + LL+ C+ D + + I
Sbjct: 127 FLRDLKPPLLDSEECRARLLKKACQARISDSFLMTRDEMADIFYLEDRTIEQQTPLLSDV 186
Query: 309 XXXXXXYIMELLKYIATKHRENLMDSSNLAIVMAPSI 419
Y+M L IA ++ M NLAIV+ S+
Sbjct: 187 HASTLGYVMRQLYRIAAHSDQHKMSIENLAIVLVGSV 223
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 36.7 bits (81), Expect = 0.011
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 19/157 (12%)
Frame = +3
Query: 6 RMIVAEMSSVLRGNAHIEGLFRKAGSQAR--QKDIKKLLDAGGCVSEGHHPIDVASVLKL 179
+ IV + + + +G+FRK G+ R + +++ + + + IDV +++K
Sbjct: 67 KFIVNAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQRDIPNDYSVIDVCTMVKR 126
Query: 180 YLRCLPEPLI-SAEVQELLLR--CRLTAGDDAI--------------KPIXXXXXXXXXX 308
+LR L PL+ S E + LL+ C+ D + + I
Sbjct: 127 FLRDLKPPLLDSEECRARLLKKACQARISDGFLMTRDEMADVFYMEDRTIEQQTPLLSDA 186
Query: 309 XXXXXXYIMELLKYIATKHRENLMDSSNLAIVMAPSI 419
Y+M L IA ++ M NLAIV S+
Sbjct: 187 HASTLGYVMRQLNRIAAHSEQHKMSIENLAIVFIGSV 223
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 35.9 bits (79), Expect = 0.019
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Frame = +3
Query: 42 GNAHIEGLFRKAGSQARQKDI-KKLLDAGGC-VSEGHHPIDV-ASVLKLYLRCLPEPLIS 212
G EGL+R G+Q ++ K+ L G VS P+ V A+ LK + CLPE LI
Sbjct: 1176 GGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAATALKSFFSCLPESLIP 1235
Query: 213 AEVQELLLRCRLTAGDDAIKPIXXXXXXXXXXXXXXXXYIMELLKYI--ATKHRENLMDS 386
L + + DD IK I + L+ ++ + + +M+S
Sbjct: 1236 T-AYHLRWKQIMMVSDD-IKKIDGIRDALAILPVSNQKVLQYLVTHLTKVSCSPKTVMNS 1293
Query: 387 SNLAIVMAPSI 419
+NL+ V P++
Sbjct: 1294 NNLSKVWTPTL 1304
>AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4b protein.
Length = 285
Score = 35.5 bits (78), Expect = 0.025
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +3
Query: 6 RMIVAEMSSVLRGNAHIEGLFRKAGSQAR--QKDIKKLLDAGGCVSEGHHPIDVASVLKL 179
+ IV + + + +G+FRK G+ R + +++ + + + IDV +++K
Sbjct: 67 KFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMVKR 126
Query: 180 YLRCLPEPLISAE 218
+LR L PL+ +E
Sbjct: 127 FLRDLKPPLLDSE 139
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 33.5 bits (73), Expect = 0.10
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +3
Query: 60 GLFRKAGSQARQKDIKKLLD--AGGCVS-----EGHHPIDVASVLKLYLRCLPEPLISAE 218
GLFR AG+ R + ++ L+ GG V E DVA++LK Y R LP+ L+ E
Sbjct: 548 GLFRVAGNTKRCRQLRNALEKVGGGAVINDNMVENTTSHDVATLLKEYFRDLPQSLLPGE 607
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 31.9 bits (69), Expect = 0.31
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 57 EGLFRKAGSQARQKDIKKLLDAGGCV--SEGHHPIDVASVLKLYLRCLPEPLISAEVQEL 230
EG++R + ++R ++++ + G + ++ H D A ++K +LR +PEP++ E +
Sbjct: 91 EGIYRLSPPKSRLDELERRANCGEKMIFADAH---DAAGLIKRFLRQIPEPVVPIEFDSI 147
Query: 231 LLRC 242
C
Sbjct: 148 AESC 151
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 30.7 bits (66), Expect = 0.71
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 159 VASVLKLYLRCLPEPLISAEVQELLLRCRLTA 254
+A ++K +LR LPEPLIS ++ +LL A
Sbjct: 560 IACLIKDFLRELPEPLISPQIHGMLLEAASVA 591
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 30.7 bits (66), Expect = 0.71
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 159 VASVLKLYLRCLPEPLISAEVQELLLRCRLTA 254
+A ++K +LR LPEPLIS ++ +LL A
Sbjct: 758 IACLIKDFLRELPEPLISPQIHGMLLEAASVA 789
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 30.7 bits (66), Expect = 0.71
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 159 VASVLKLYLRCLPEPLISAEVQELLLRCRLTA 254
+A ++K +LR LPEPLIS ++ +LL A
Sbjct: 826 IACLIKDFLRELPEPLISPQIHGMLLEAASVA 857
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 30.7 bits (66), Expect = 0.71
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 159 VASVLKLYLRCLPEPLISAEVQELLLRCRLTA 254
+A ++K +LR LPEPLIS ++ +LL A
Sbjct: 758 IACLIKDFLRELPEPLISPQIHGMLLEAASVA 789
>U41013-3|AAA82302.1| 433|Caenorhabditis elegans Protein kinase
protein 26 protein.
Length = 433
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 141 GHHPIDVASVLKLYLRCLPEPLISAEVQELLLRCRLTAGDD 263
G P DVA+ + R P P AE+Q ++ RC +D
Sbjct: 332 GMKPADVATQVANGYRMPPYPHAQAEIQTMMARCNAENPND 372
>Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical
protein M18.7a protein.
Length = 240
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +3
Query: 39 RGNAHIEGLFRKAGSQARQKDIKKLLDAGGCVSEGHHPIDVASVLKLYLRCLPEPLISAE 218
RGN GL R++G KD+ + + G S G+ + V+++ + L +IS++
Sbjct: 35 RGNTRPTGLPRRSGGSGGWKDLDAVQN-HGISSRGND----SKVIRVNISNLAPTVISSD 89
Query: 219 VQELLLRCRLTA 254
++EL RL++
Sbjct: 90 LEELFGDYRLSS 101
>U10438-12|ABB88244.1| 325|Caenorhabditis elegans Hypothetical
protein B0280.1b protein.
Length = 325
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 59 RFISQGGITGSPERYKEVTRCWWL 130
R GG+ G PE+ +V WW+
Sbjct: 228 RQCDSGGLNGRPEKLPDVCYSWWV 251
>U10438-11|AAL50321.1| 335|Caenorhabditis elegans Hypothetical
protein B0280.1a protein.
Length = 335
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 59 RFISQGGITGSPERYKEVTRCWWL 130
R GG+ G PE+ +V WW+
Sbjct: 228 RQCDSGGLNGRPEKLPDVCYSWWV 251
>AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical
protein BE0003N10.2 protein.
Length = 427
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 159 VASVLKLYLRCLPEPLISAEVQELLL 236
V +LKLY R LP+ LI V + LL
Sbjct: 368 VCGLLKLYFRLLPQQLIPFSVHKQLL 393
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,940,603
Number of Sequences: 27780
Number of extensions: 226302
Number of successful extensions: 666
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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