Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_N08
         (544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   4.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   6.1  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   8.1  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   8.1  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 138 LRHSHQHLVTSLYLSGEPVIPPC 70
           L  S+   V S+Y SG     PC
Sbjct: 372 LSESYSSYVNSMYASGAQFATPC 394


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 393 DLMNPSSFLYVSSLCTLATP 334
           D +NP+ F+Y  S+  L  P
Sbjct: 118 DRLNPNLFIYALSVAILHRP 137


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 102 IKKLLDAGGCVSEG 143
           IK +LD G C +EG
Sbjct: 44  IKCMLDEGPCTNEG 57


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 102 IKKLLDAGGCVSEG 143
           IK +LD G C +EG
Sbjct: 44  IKCMLDEGPCTNEG 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,383
Number of Sequences: 438
Number of extensions: 2706
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)