Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_N05
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81532-8|CAB04327.2| 248|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 36 0.018
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 36 0.018
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 36 0.032
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 36 0.032
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 36 0.032
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 36 0.032
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 36 0.032
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 36 0.032
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 36 0.032
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 36 0.032
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 33 0.23
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 32 0.30
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 32 0.40
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 31 0.52
Z82062-3|CAB04892.1| 384|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defecti... 29 3.7
AC006651-12|AAM48541.1| 231|Caenorhabditis elegans Hypothetical... 29 3.7
AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical... 29 3.7
AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical... 29 3.7
Z70205-1|CAA94117.2| 460|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z37983-3|CAA86056.1| 621|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 4.9
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 28 6.4
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 28 6.4
Z75526-4|CAA99770.1| 360|Caenorhabditis elegans Hypothetical pr... 27 8.5
EF409995-1|ABN58742.1| 410|Caenorhabditis elegans reduced folat... 27 8.5
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 27 8.5
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 27 8.5
AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z81532-8|CAB04327.2| 248|Caenorhabditis elegans Hypothetical
protein F36F2.4 protein.
Length = 248
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = +3
Query: 228 SSTITSNIEKISQNVSSMSKMVNQLQTAQDSQELRSQL--RQIQNYTQKLAKDTSNMIKD 401
+S + NI+ ++Q V + + L + +S + +L R+ N Q+L+K+T+ ++K
Sbjct: 12 ASQLQLNIQNLNQQVIQLESFITNLSDSSESGQRERELFNRKAHN-AQELSKETNALLKR 70
Query: 402 LMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSK 524
L+ + + RERL +E++ LN+ QA+Q+ AAQ K
Sbjct: 71 LVVMSNSDKNLRGVRERLQNEYIGVLNRLQASQRKAAQTEK 111
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 36.3 bits (80), Expect = 0.018
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Frame = +3
Query: 153 LTLRMETSYQGGVSYGDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQL--QTAQDSQE 326
L L +ET + + +L +T+ S + I+ + M + L Q + QE
Sbjct: 900 LFLSLETEKANLADAEERNEKLNQLKATLESKLSDITGQLEDMQERNEDLARQKKKTDQE 959
Query: 327 LRSQLRQIQNYTQKLAKDTSNMIKDLMKQPCDHQGNKLNRERLS-DEFMATLNKFQATQK 503
L + +Q+ L K KQ DH L E + DE +A LNK + Q+
Sbjct: 960 LSDTKKHVQDLELSLRKAEQE------KQSRDHNIRSLQDEMANQDEAVAKLNKEKKHQE 1013
Query: 504 LAAQKSKEDVKN 539
+ +K ED+++
Sbjct: 1014 ESNRKLNEDLQS 1025
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 36.3 bits (80), Expect = 0.018
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Frame = +3
Query: 153 LTLRMETSYQGGVSYGDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQL--QTAQDSQE 326
L L +ET + + +L +T+ S + I+ + M + L Q + QE
Sbjct: 900 LFLSLETEKANLADAEERNEKLNQLKATLESKLSDITGQLEDMQERNEDLARQKKKTDQE 959
Query: 327 LRSQLRQIQNYTQKLAKDTSNMIKDLMKQPCDHQGNKLNRERLS-DEFMATLNKFQATQK 503
L + +Q+ L K KQ DH L E + DE +A LNK + Q+
Sbjct: 960 LSDTKKHVQDLELSLRKAEQE------KQSRDHNIRSLQDEMANQDEAVAKLNKEKKHQE 1013
Query: 504 LAAQKSKEDVKN 539
+ +K ED+++
Sbjct: 1014 ESNRKLNEDLQS 1025
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 GDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQT-AQDSQELRSQLRQIQNYTQKLA 374
GD L S ++K + + + + +L+ A + E++ QL TQK A
Sbjct: 2273 GDQLATLDSLKSRF-GGVDKALEKLKGILEATEELEVDATNRAEIQEQLET----TQKKA 2327
Query: 375 KDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVK 536
+ I+++ K + Q L E+ DE + T+N + +LAA + E +K
Sbjct: 2328 DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLK 2381
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 GDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQT-AQDSQELRSQLRQIQNYTQKLA 374
GD L S ++K + + + + +L+ A + E++ QL TQK A
Sbjct: 2273 GDQLATLDSLKSRF-GGVDKALEKLKGILEATEELEVDATNRAEIQEQLET----TQKKA 2327
Query: 375 KDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVK 536
+ I+++ K + Q L E+ DE + T+N + +LAA + E +K
Sbjct: 2328 DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLK 2381
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 GDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQT-AQDSQELRSQLRQIQNYTQKLA 374
GD L S ++K + + + + +L+ A + E++ QL TQK A
Sbjct: 2273 GDQLATLDSLKSRF-GGVDKALEKLKGILEATEELEVDATNRAEIQEQLET----TQKKA 2327
Query: 375 KDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVK 536
+ I+++ K + Q L E+ DE + T+N + +LAA + E +K
Sbjct: 2328 DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLK 2381
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 GDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQT-AQDSQELRSQLRQIQNYTQKLA 374
GD L S ++K + + + + +L+ A + E++ QL TQK A
Sbjct: 2273 GDQLATLDSLKSRF-GGVDKALEKLKGILEATEELEVDATNRAEIQEQLET----TQKKA 2327
Query: 375 KDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVK 536
+ I+++ K + Q L E+ DE + T+N + +LAA + E +K
Sbjct: 2328 DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLK 2381
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 GDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQT-AQDSQELRSQLRQIQNYTQKLA 374
GD L S ++K + + + + +L+ A + E++ QL TQK A
Sbjct: 2273 GDQLATLDSLKSRF-GGVDKALEKLKGILEATEELEVDATNRAEIQEQLET----TQKKA 2327
Query: 375 KDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVK 536
+ I+++ K + Q L E+ DE + T+N + +LAA + E +K
Sbjct: 2328 DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLK 2381
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 GDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQT-AQDSQELRSQLRQIQNYTQKLA 374
GD L S ++K + + + + +L+ A + E++ QL TQK A
Sbjct: 2273 GDQLATLDSLKSRF-GGVDKALEKLKGILEATEELEVDATNRAEIQEQLET----TQKKA 2327
Query: 375 KDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVK 536
+ I+++ K + Q L E+ DE + T+N + +LAA + E +K
Sbjct: 2328 DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLK 2381
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 GDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQT-AQDSQELRSQLRQIQNYTQKLA 374
GD L S ++K + + + + +L+ A + E++ QL TQK A
Sbjct: 2273 GDQLATLDSLKSRF-GGVDKALEKLKGILEATEELEVDATNRAEIQEQLET----TQKKA 2327
Query: 375 KDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVK 536
+ I+++ K + Q L E+ DE + T+N + +LAA + E +K
Sbjct: 2328 DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLK 2381
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 GDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQT-AQDSQELRSQLRQIQNYTQKLA 374
GD L S ++K + + + + +L+ A + E++ QL TQK A
Sbjct: 2273 GDQLATLDSLKSRF-GGVDKALEKLKGILEATEELEVDATNRAEIQEQLET----TQKKA 2327
Query: 375 KDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVK 536
+ I+++ K + Q L E+ DE + T+N + +LAA + E +K
Sbjct: 2328 DELERKIENVKKAALNAQNEGLELEKKLDELIGTVNSAENELELAAPIAAESLK 2381
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical protein
F48F5.1 protein.
Length = 1291
Score = 32.7 bits (71), Expect = 0.23
Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Frame = +3
Query: 207 EQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQTAQDSQELRSQLR--QIQNYTQKLA-- 374
E+N QR+++ + KI + S+M K+V++ Q ++ EL+++LR Q ++ +K+A
Sbjct: 807 EENEQRIAAEKNALEAKIKEK-SNMRKVVDE-QNQREKDELQAKLRADQEKSEARKIAEK 864
Query: 375 -KDTSNMIKDLMKQPCDH---QGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVKNV 542
KD N + K D + K+ ++ ++ +K QA KL A + K + + +
Sbjct: 865 KKDEQNQKEKEAKLRADQEKSEARKVAEKKKDEQNQKEKDKLQA--KLRADQEKSEARKI 922
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 32.3 bits (70), Expect = 0.30
Identities = 25/120 (20%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +3
Query: 207 EQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQTAQ-DSQELRSQLRQIQNYTQKLAKDT 383
++N Q+ + IE + Q S +++V ++ + + +LR + +++ KLA++
Sbjct: 505 DENRQKALDEQRAFIEAMQQRESEKTQLVVRISELETEMNKLRQEGKKVTT-AAKLAEER 563
Query: 384 SNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVKNVKAQSVNI 563
+KDL +Q + +++ L+D M L + + + +K+++++KN+K Q + +
Sbjct: 564 RQKLKDLERQHAE------DKKVLND--MKKLQETRRRMEETLKKTEDELKNLKTQRLRL 615
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 315 DSQELRSQLRQIQNYTQKLAKDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQA 494
+ QELR QL + QN Q+L ++MI L + N+L + S + K +
Sbjct: 17 EKQELRKQLDREQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELEAEKIAS 76
Query: 495 TQKLAAQKSK-EDVKNVKAQSVNIGD 569
+ A KS+ + KN S+ GD
Sbjct: 77 NAEAARLKSELQKAKNEIQDSIKDGD 102
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 315 DSQELRSQLRQIQNYTQKLAKDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQA 494
+ QELR QL + QN Q+L ++MI L + N+L + S + K +
Sbjct: 17 EKQELRKQLDREQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELEAEKIAS 76
Query: 495 TQKLAAQKSK-EDVKNVKAQSVNIGD 569
+ A KS+ + KN S+ GD
Sbjct: 77 NAEAARLKSELQKAKNEIQDSIKDGD 102
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 31.5 bits (68), Expect = 0.52
Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Frame = +3
Query: 249 IEKISQNVSSMSKMVNQLQTAQDSQELRSQLRQIQNY---TQKLAKDTSNMIKDLMKQPC 419
+EKI S ++Q ++ ++SQ++ + +I++ Q ++ + I+ MKQ
Sbjct: 576 LEKIETKHLRKSLKLSQQESEENSQKISEKNEEIEHLRAQVQTTQQELNETIRLQMKQIL 635
Query: 420 DHQGNKLNRERL-----SDEFMATLNKFQATQKLAAQKSKEDVKNVKAQS 554
DHQ N L ++ L +E + QA Q AQ+ K ++N++ ++
Sbjct: 636 DHQ-NALVKKSLQVIERDEEIQLLKGQIQAQQNAIAQQ-KISIRNLELEN 683
>Z82062-3|CAB04892.1| 384|Caenorhabditis elegans Hypothetical
protein W02A11.5 protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/93 (20%), Positives = 51/93 (54%)
Frame = +3
Query: 354 NYTQKLAKDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDV 533
N T K +D+ +K+ +++ ++L R ++ LNK + + K + Q+++ED+
Sbjct: 44 NTTLKRIEDSCEELKNEIREHVQVSSDELKSIRTANS--GFLNKIEESLKTSQQEAREDL 101
Query: 534 KNVKAQSVNIGDPFAVSNANNSKELIEMDDASL 632
K ++ ++ ++ + +++ KE ++ +A+L
Sbjct: 102 KAIEKKNESLLNK-SLNELKFQKEQLKYVEATL 133
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 207 EQNFQRLSSTITSNI-EKISQNVSSMSKMVNQLQTAQDSQELRSQLRQIQNYTQKLAKDT 383
E++ Q+ +S N +K Q K T+++S+E RQ++ KLA D
Sbjct: 21 EKSTQKKNSLEKKNKKDKKKQKERKKKKEARDSSTSEESEESGESQRQLEKVKSKLAVDA 80
Query: 384 SNMIK 398
+N+ K
Sbjct: 81 ANIDK 85
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 207 EQNFQRLSSTITSNI-EKISQNVSSMSKMVNQLQTAQDSQELRSQLRQIQNYTQKLAKDT 383
E++ Q+ +S N +K Q K T+++S+E RQ++ KLA D
Sbjct: 21 EKSTQKKNSLEKKNKKDKKKQKERKKKKEARDSSTSEESEESGESQRQLEKVKSKLAVDA 80
Query: 384 SNMIK 398
+N+ K
Sbjct: 81 ANIDK 85
>U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defective
protein 5 protein.
Length = 1198
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 237 ITSNIEKISQNVSSMSKMVNQ-LQTAQDSQELRSQLRQIQNYTQKLAKDTSNMIKDLMKQ 413
+ +N+ +++ + + +N+ L QE R + ++L + +L K
Sbjct: 773 LEANLHQVNSKLGEVRCELNEALARVDGEQETRVKAENALEEARQLISSLKHEENELKKT 832
Query: 414 PCDHQGNKLNRERLSDEFMATLNKFQATQKLAAQKSKEDVKNVKAQSVNIGDPFAVSNAN 593
D G +LN + SDEF+ K + + L +K +++ + ++ +N G A
Sbjct: 833 ITD-MGMRLNEAKKSDEFL----KSELSTALEEEKKSQNLADELSEELN-GWRMRTKEAE 886
Query: 594 NSKE 605
N E
Sbjct: 887 NKVE 890
>AC006651-12|AAM48541.1| 231|Caenorhabditis elegans Hypothetical
protein H06I04.1c protein.
Length = 231
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/109 (22%), Positives = 52/109 (47%)
Frame = +3
Query: 297 QLQTAQDSQELRSQLRQIQNYTQKLAKDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMAT 476
+L+ ++SQEL + ++ + +++LAK N DL P + L DEF
Sbjct: 12 KLEMQRNSQELEKKYKKAKFASRELAKILEN---DLCGTPTT---SNLKNFESDDEFFEE 65
Query: 477 LNKFQATQKLAAQKSKEDVKNVKAQSVNIGDPFAVSNANNSKELIEMDD 623
+ F+ ++ L+ Q+ D+ K + ++ + N + +LI+ ++
Sbjct: 66 KSLFEKSRALSRQQIPNDLLE-KTRKIDFSEAKNAKNQDLIDKLIDENE 113
>AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical
protein H06I04.1b protein.
Length = 428
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/109 (22%), Positives = 52/109 (47%)
Frame = +3
Query: 297 QLQTAQDSQELRSQLRQIQNYTQKLAKDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMAT 476
+L+ ++SQEL + ++ + +++LAK N DL P + L DEF
Sbjct: 209 KLEMQRNSQELEKKYKKAKFASRELAKILEN---DLCGTPTT---SNLKNFESDDEFFEE 262
Query: 477 LNKFQATQKLAAQKSKEDVKNVKAQSVNIGDPFAVSNANNSKELIEMDD 623
+ F+ ++ L+ Q+ D+ K + ++ + N + +LI+ ++
Sbjct: 263 KSLFEKSRALSRQQIPNDLLE-KTRKIDFSEAKNAKNQDLIDKLIDENE 310
>AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical
protein H06I04.1a protein.
Length = 456
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/109 (22%), Positives = 52/109 (47%)
Frame = +3
Query: 297 QLQTAQDSQELRSQLRQIQNYTQKLAKDTSNMIKDLMKQPCDHQGNKLNRERLSDEFMAT 476
+L+ ++SQEL + ++ + +++LAK N DL P + L DEF
Sbjct: 209 KLEMQRNSQELEKKYKKAKFASRELAKILEN---DLCGTPTT---SNLKNFESDDEFFEE 262
Query: 477 LNKFQATQKLAAQKSKEDVKNVKAQSVNIGDPFAVSNANNSKELIEMDD 623
+ F+ ++ L+ Q+ D+ K + ++ + N + +LI+ ++
Sbjct: 263 KSLFEKSRALSRQQIPNDLLE-KTRKIDFSEAKNAKNQDLIDKLIDENE 310
>Z70205-1|CAA94117.2| 460|Caenorhabditis elegans Hypothetical
protein C11H1.2 protein.
Length = 460
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 252 EKISQNVSSMSKMVNQLQTAQDSQELRSQLRQIQNYTQKL 371
EK+SQ S +SK+ + + L+SQ+ ++QN + L
Sbjct: 221 EKVSQEPSFLSKLWSNFSENSNENNLQSQISKMQNEIKPL 260
>Z37983-3|CAA86056.1| 621|Caenorhabditis elegans Hypothetical
protein B0393.3 protein.
Length = 621
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 138 QCSEVLTLRMETSYQGGVSYGDGEQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQT 308
QC+++ LRM+ SY G + Q ++L + K Q M + +LQT
Sbjct: 162 QCNQLEELRMDASYINGHCFSKAPQTLRKLELECCQTLNK--QGFIGMCSRLFKLQT 216
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = +3
Query: 303 QTAQDSQELRSQLRQIQNYTQKLAKDTSNMIKDLMKQPCD------HQGNKLNRE-RLSD 461
Q AQD Q+ + R+ TQK A++ +D K D Q L +E R +
Sbjct: 194 QNAQDDQKYHDEARKKYIETQKKAEENEEKRRDAQKAERDAHIARHKQAEALEKEKREQE 253
Query: 462 EFMATLNKFQATQK 503
E M ++ +ATQK
Sbjct: 254 EKMKKEDRERATQK 267
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/114 (19%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Frame = +3
Query: 222 RLSSTITSNIEKISQNVSSMSKMVNQLQTAQDSQELRSQL-----RQIQNYTQKLAKDTS 386
+L + I N+ ++S+N ++ ++ +++Q +QD+ ++ S + Q+ + K ++T+
Sbjct: 329 QLEARIEENVFELSENKQNVKRLEDKVQESQDALQMLSNINGSNEEQMISLNSKFERNTA 388
Query: 387 --NMIKDLMKQPCDHQGNKLNRER-----LSDEFMATLNKFQATQKLAAQKSKE 527
I+ + ++ QG +L L++E + + + L +K+KE
Sbjct: 389 ERKRIEAVFEEKVTVQGERLKTLEMANLDLTNELASMGSLLDKERSLLEEKNKE 442
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/114 (19%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Frame = +3
Query: 222 RLSSTITSNIEKISQNVSSMSKMVNQLQTAQDSQELRSQL-----RQIQNYTQKLAKDTS 386
+L + I N+ ++S+N ++ ++ +++Q +QD+ ++ S + Q+ + K ++T+
Sbjct: 331 QLEARIEENVFELSENKQNVKRLEDKVQESQDALQMLSNINGSNEEQMISLNSKFERNTA 390
Query: 387 --NMIKDLMKQPCDHQGNKLNRER-----LSDEFMATLNKFQATQKLAAQKSKE 527
I+ + ++ QG +L L++E + + + L +K+KE
Sbjct: 391 ERKRIEAVFEEKVTVQGERLKTLEMANLDLTNELASMGSLLDKERSLLEEKNKE 444
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/114 (19%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Frame = +3
Query: 222 RLSSTITSNIEKISQNVSSMSKMVNQLQTAQDSQELRSQL-----RQIQNYTQKLAKDTS 386
+L + I N+ ++S+N ++ ++ +++Q +QD+ ++ S + Q+ + K ++T+
Sbjct: 331 QLEARIEENVFELSENKQNVKRLEDKVQESQDALQMLSNINGSNEEQMISLNSKFERNTA 390
Query: 387 --NMIKDLMKQPCDHQGNKLNRER-----LSDEFMATLNKFQATQKLAAQKSKE 527
I+ + ++ QG +L L++E + + + L +K+KE
Sbjct: 391 ERKRIEAVFEEKVTVQGERLKTLEMANLDLTNELASMGSLLDKERSLLEEKNKE 444
>Z75526-4|CAA99770.1| 360|Caenorhabditis elegans Hypothetical
protein C06H2.4 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Frame = +3
Query: 207 EQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQTAQDSQELRSQ----------LRQIQN 356
+Q + + S T K+S K+ +LQ +QEL + Q+QN
Sbjct: 201 QQTVESVESVQTPKAVKMSYTREYFKKISEELQICSKNQELLKWSLWWALASCGVYQVQN 260
Query: 357 YTQKLAKDTSNMIKDL 404
YTQ L K+ N D+
Sbjct: 261 YTQSLWKELQNNPDDV 276
>EF409995-1|ABN58742.1| 410|Caenorhabditis elegans reduced folate
carrier protein.
Length = 410
Score = 27.5 bits (58), Expect = 8.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Frame = +3
Query: 207 EQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQTAQDSQELRSQ----------LRQIQN 356
+Q + + S T K+S K+ +LQ +QEL + Q+QN
Sbjct: 201 QQTVESVESVQTPKAVKMSYTREYFKKISEELQICSKNQELLKWSLWWALASCGVYQVQN 260
Query: 357 YTQKLAKDTSNMIKDL 404
YTQ L K+ N D+
Sbjct: 261 YTQSLWKELQNNPDDV 276
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 93 HFRL*YCV*YFKIKLQCSEVLTLRMETSYQGGVSYGDGEQNFQRLSSTITSNI 251
H + Y Y K +E L+ Y G V+ G QNFQ L T +SN+
Sbjct: 41 HLKAKYVPGYIPNKDAFNEGLSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNL 93
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 27.5 bits (58), Expect = 8.5
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Frame = +3
Query: 264 QNVSSMSKMVNQLQTAQDSQELRSQLRQIQNYTQKLAKDTS-NMIKDLMKQPCD-HQGNK 437
+ V+S K L Q+ Q+ +SQL QN+TQ +++ S + K+ +P D QG +
Sbjct: 626 EEVNSKKKKNKTLAEKQNVQQSKSQL---QNHTQNQSQNQSQDHEKNSKTKPKDPKQGTR 682
Query: 438 L--------NRERLSDEFMATLNKFQATQKLAAQKSKEDVKNVKAQSVNIGD 569
L + L + + + +K+AA KS DV QS D
Sbjct: 683 LFVPKALRKEADDLPANGLLSPQSVETKEKIAAAKSNGDVFKSDEQSKGFWD 734
>AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical
protein F18A12.4 protein.
Length = 674
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 207 EQNFQRLSSTITSNIEKISQNVSSMSKMVNQLQTAQDSQELRSQLRQIQNYTQKLAKDTS 386
E F R++ T+ S + S +S +S+++ DS+E+ + + + KLAK S
Sbjct: 194 EGKFVRIAPTLGSIVHN-STMISMISEILEANGVQPDSEEISKEFEEYSSLQMKLAKYQS 252
Query: 387 N 389
+
Sbjct: 253 S 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,116,659
Number of Sequences: 27780
Number of extensions: 248073
Number of successful extensions: 830
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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