BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_N02
(593 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 25 0.42
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 0.42
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 0.98
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 0.98
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 24 0.98
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 24 0.98
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 24 0.98
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 24 0.98
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 24 0.98
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 24 0.98
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 24 0.98
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 24 0.98
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 24 0.98
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 24 0.98
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 24 0.98
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 0.98
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 1.7
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 1.7
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 1.7
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 1.7
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 1.7
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 1.7
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 1.7
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 1.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 22 5.2
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 25.4 bits (53), Expect = 0.42
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNNF 530
I+ +L N++Y +NN+NN+
Sbjct: 81 IISSLSNNYKYSNYNNYNNY 100
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 25.4 bits (53), Expect = 0.42
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNNF 530
I+ +L N++Y +NN+NN+
Sbjct: 314 IISSLSNNYKYSNYNNYNNY 333
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 81 IISSLSNNYKYSNYNNYNN 99
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N++Y +NN+NN
Sbjct: 314 IISSLSNNYKYSNYNNYNN 332
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2
Query: 571 FNHRY*KHNNFNN 533
+N+ Y +NN+NN
Sbjct: 330 YNNNYNNYNNYNN 342
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N+ Y +NN+NN
Sbjct: 81 IISSLSNNYNYSNYNNYNN 99
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N+ Y +NN+NN
Sbjct: 81 IISSLSNNYNYSNYNNYNN 99
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N+ Y +NN+NN
Sbjct: 81 IISSLSNNYNYSNYNNYNN 99
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N+ Y +NN+NN
Sbjct: 81 IISSLSNNYNYSNYNNYNN 99
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N+ Y +NN+NN
Sbjct: 81 IISSLSNNYNYSNYNNYNN 99
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N+ Y +NN+NN
Sbjct: 81 IISSLSNNYNYSNYNNYNN 99
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N+ Y +NN+NN
Sbjct: 81 IISSLSNNYNYSNYNNYNN 99
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N+ Y +NN+NN
Sbjct: 81 IISSLSNNYNYSNYNNYNN 99
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 589 ILETLEFNHRY*KHNNFNN 533
I+ +L N+ Y +NN+NN
Sbjct: 81 IVSSLSNNYNYSNYNNYNN 99
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.8 bits (44), Expect = 5.2
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 135 LMKSKSFWRFLWVFIWSARSCLFSALCSSRFAFRVAA 25
++ SK + LW+F S + + L S+ FR+ A
Sbjct: 364 IISSKKDRQELWIFTISFQKYMSGTLNSNETNFRIQA 400
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,881
Number of Sequences: 438
Number of extensions: 2292
Number of successful extensions: 27
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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