Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_N01
         (575 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17519-2|CAB43537.1|  363|Homo sapiens Leu-8 antigen short form ...    32   1.3  
X17519-1|CAB43536.1|  385|Homo sapiens protein ( Human mRNA for ...    32   1.3  
X16150-1|CAA34275.1|  372|Homo sapiens protein ( Human Lyam-1 mR...    32   1.3  
X16070-1|CAA34203.1|  372|Homo sapiens pln homing receptor protein.    32   1.3  
M32414-1|AAB60700.1|  372|Homo sapiens protein ( Human leukocyte...    32   1.3  
M25280-1|AAC63053.1|  372|Homo sapiens LNHR protein.                   32   1.3  
BC020758-1|AAH20758.1|  375|Homo sapiens SELL protein protein.         32   1.3  
AY233976-1|AAO48272.1|  372|Homo sapiens selectin L (lymphocyte ...    32   1.3  
AL021940-1|CAI19356.1|  385|Homo sapiens selectin L (lymphocyte ...    32   1.3  
AJ246000-1|CAB55488.1|  385|Homo sapiens L-selectin protein.           32   1.3  

>X17519-2|CAB43537.1|  363|Homo sapiens Leu-8 antigen short form
           protein.
          Length = 363

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 32  NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
           N E C+ I      D  KW+D ACH +K  +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168


>X17519-1|CAB43536.1|  385|Homo sapiens protein ( Human mRNA for
           Leu-8 pan leukocyte antigen. ).
          Length = 385

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 32  NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
           N E C+ I      D  KW+D ACH +K  +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168


>X16150-1|CAA34275.1|  372|Homo sapiens protein ( Human Lyam-1 mRNA
           for leukocyte adhesion molecule-1. ).
          Length = 372

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 32  NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
           N E C+ I      D  KW+D ACH +K  +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155


>X16070-1|CAA34203.1|  372|Homo sapiens pln homing receptor protein.
          Length = 372

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 32  NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
           N E C+ I      D  KW+D ACH +K  +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155


>M32414-1|AAB60700.1|  372|Homo sapiens protein ( Human leukocyte
           adhesion molecule-1 (LAM-1), exon 9. ).
          Length = 372

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 32  NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
           N E C+ I      D  KW+D ACH +K  +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155


>M25280-1|AAC63053.1|  372|Homo sapiens LNHR protein.
          Length = 372

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 32  NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
           N E C+ I      D  KW+D ACH +K  +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155


>BC020758-1|AAH20758.1|  375|Homo sapiens SELL protein protein.
          Length = 375

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 32  NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
           N E C+ I      D  KW+D ACH +K  +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168


>AY233976-1|AAO48272.1|  372|Homo sapiens selectin L (lymphocyte
           adhesion molecule 1) protein.
          Length = 372

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 32  NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
           N E C+ I      D  KW+D ACH +K  +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155


>AL021940-1|CAI19356.1|  385|Homo sapiens selectin L (lymphocyte
           adhesion molecule 1) protein.
          Length = 385

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 32  NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
           N E C+ I      D  KW+D ACH +K  +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168


>AJ246000-1|CAB55488.1|  385|Homo sapiens L-selectin protein.
          Length = 385

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 32  NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
           N E C+ I      D  KW+D ACH +K  +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,265,374
Number of Sequences: 237096
Number of extensions: 1294354
Number of successful extensions: 1986
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1986
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)