Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_M24
(645 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 324 3e-89
03_01_0547 + 4093196-4093657,4094267-4095148 324 3e-89
03_01_0544 + 4082528-4082989,4083585-4084466 324 3e-89
03_01_0543 + 4076981-4077442,4078145-4079026 324 3e-89
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 84 1e-16
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 77 1e-14
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 77 1e-14
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 71 8e-13
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 66 2e-11
02_04_0462 + 23131433-23132836 62 3e-10
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 57 1e-08
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 30 1.4
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 30 1.8
11_06_0516 + 24502645-24504507 29 4.2
10_08_1038 - 22485394-22485960,22486712-22487197 28 5.5
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 28 5.5
02_05_1202 + 34932291-34933027,34933297-34933774 28 5.5
09_04_0281 - 16360082-16361059,16361608-16361688,16363287-163636... 28 7.3
06_03_1311 - 29241884-29242054,29242802-29242879,29242968-292430... 28 7.3
03_03_0225 - 15587557-15588774 28 7.3
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 28 7.3
11_06_0596 + 25385744-25388890 27 9.7
11_04_0242 - 15273774-15274043,15274131-15274235 27 9.7
09_04_0749 + 19919367-19920869 27 9.7
04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 27 9.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 324 bits (797), Expect = 3e-89
Identities = 148/207 (71%), Positives = 177/207 (85%)
Frame = +3
Query: 6 RDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
+DVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGF 298
Query: 186 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 365
NVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 366 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPXLGRFAVRDMR 545
KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+P LGRFAVRDMR
Sbjct: 359 KFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMR 418
Query: 546 QTVAVGVIKAVNFKEAGGGKVTKAAEK 626
QTVAVGVIK V K+ G KVTKAA K
Sbjct: 419 QTVAVGVIKNVEKKDPTGAKVTKAAAK 445
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 324 bits (797), Expect = 3e-89
Identities = 148/207 (71%), Positives = 177/207 (85%)
Frame = +3
Query: 6 RDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
+DVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGF 298
Query: 186 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 365
NVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 366 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPXLGRFAVRDMR 545
KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+P LGRFAVRDMR
Sbjct: 359 KFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMR 418
Query: 546 QTVAVGVIKAVNFKEAGGGKVTKAAEK 626
QTVAVGVIK V K+ G KVTKAA K
Sbjct: 419 QTVAVGVIKNVEKKDPTGAKVTKAAAK 445
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 324 bits (797), Expect = 3e-89
Identities = 148/207 (71%), Positives = 177/207 (85%)
Frame = +3
Query: 6 RDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
+DVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGF 298
Query: 186 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 365
NVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 366 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPXLGRFAVRDMR 545
KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+P LGRFAVRDMR
Sbjct: 359 KFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMR 418
Query: 546 QTVAVGVIKAVNFKEAGGGKVTKAAEK 626
QTVAVGVIK V K+ G KVTKAA K
Sbjct: 419 QTVAVGVIKNVEKKDPTGAKVTKAAAK 445
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 324 bits (797), Expect = 3e-89
Identities = 148/207 (71%), Positives = 177/207 (85%)
Frame = +3
Query: 6 RDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
+DVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGF 298
Query: 186 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 365
NVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 366 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPXLGRFAVRDMR 545
KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+P LGRFAVRDMR
Sbjct: 359 KFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMR 418
Query: 546 QTVAVGVIKAVNFKEAGGGKVTKAAEK 626
QTVAVGVIK V K+ G KVTKAA K
Sbjct: 419 QTVAVGVIKNVEKKDPTGAKVTKAAAK 445
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 83.8 bits (198), Expect = 1e-16
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 9/185 (4%)
Frame = +3
Query: 9 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFN 188
D YK +GTV +G++E+G ++ G ++ P +V + + ++ A P +NV
Sbjct: 234 DKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVK 291
Query: 189 VKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIA 362
+ + +++ G+V S NP +F AQ+ +L + GY VL H+
Sbjct: 292 LSGIEDEDIMAGFVL-SSIGNPVGAVTEFNAQLQILELLDNAIFTAGYKAVLHIHSVVEE 350
Query: 363 CKFAEIKEKVDRRTGKSTEDNPKS-------IKSGDAAIVNLVPSKPLCVESFQEFPXLG 521
C+ ++ E++D + K + K +K+G + + + +C+E+F +FP LG
Sbjct: 351 CEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNNLICIENFSDFPQLG 410
Query: 522 RFAVR 536
RF +R
Sbjct: 411 RFTLR 415
>04_04_1015 - 30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 77.0 bits (181), Expect = 1e-14
Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 4/191 (2%)
Frame = +3
Query: 9 DVYKIGGIGTVPV-GRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
DV K G G++ETG ++ G+ V+ +P VKS+E + A GDNV
Sbjct: 486 DVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAV 545
Query: 186 NVKNVSVKELRRGYVAGDSKNNP--PRGAADFTA-QVIVLNHPGQISNGYTPVLDCHTAH 356
+++ + +L + G NP P ++F +V+VL+ I GY H
Sbjct: 546 SLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVK 601
Query: 357 IACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPXLGRFAVR 536
A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F + LGR +R
Sbjct: 602 EAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLR 660
Query: 537 DMRQTVAVGVI 569
T+AVGV+
Sbjct: 661 SSGSTIAVGVV 671
>04_04_1008 - 30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 77.0 bits (181), Expect = 1e-14
Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 4/191 (2%)
Frame = +3
Query: 9 DVYKIGGIGTVPV-GRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
DV K G G++ETG ++ G+ V+ +P VKS+E + A GDNV
Sbjct: 486 DVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAV 545
Query: 186 NVKNVSVKELRRGYVAGDSKNNP--PRGAADFTA-QVIVLNHPGQISNGYTPVLDCHTAH 356
+++ + +L + G NP P ++F +V+VL+ I GY H
Sbjct: 546 SLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVK 601
Query: 357 IACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPXLGRFAVR 536
A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F + LGR +R
Sbjct: 602 EAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLR 660
Query: 537 DMRQTVAVGVI 569
T+AVGV+
Sbjct: 661 SSGSTIAVGVV 671
>04_04_1593 - 34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 70.9 bits (166), Expect = 8e-13
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Frame = +3
Query: 9 DVYKIGGIGTVPVG-RVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
DV+ +G V +G +VE G + G+ ++ P VK++E + + A GDNV
Sbjct: 470 DVFSSHKLGQVAIGGKVEVGATRSGSKILVMPFGELAVVKTIERNSSSCNLARAGDNVAI 529
Query: 186 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 365
++ + + G V + P A+ +++VL+ I G ++
Sbjct: 530 GLQGIDPSHIMPGGVICHP-DYPVSVASCLELKILVLDITVPILVGL---------QVSA 579
Query: 366 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPXLGRFAVRDMR 545
+I ++++TGK+++ P+ + S A++ + K +CVE F LGR +R
Sbjct: 580 SMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLRSQG 639
Query: 546 QTVAVGVIKAV 578
T+AVG++ V
Sbjct: 640 NTIAVGIVSRV 650
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 66.5 bits (155), Expect = 2e-11
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Frame = +3
Query: 9 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFN 188
D YK +GTV +G++E+G + G ++ P +V SV + ++ A PG+NV
Sbjct: 189 DKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVK 246
Query: 189 VKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIA 362
+ + ++ G+V K NP ++F AQ+ +L + GY VL H+
Sbjct: 247 LSGIEEDDITAGFVLSSIK-NPVSAISEFRAQLQILELLDNAIFTAGYKAVLHIHSVVEE 305
Query: 363 CKFAEIKEKVDRRTGKSTEDNPKSIK 440
C+ E+ E++D + K + K K
Sbjct: 306 CEIVELIEEIDLKRRKEGDIKKKKSK 331
>02_04_0462 + 23131433-23132836
Length = 467
Score = 62.5 bits (145), Expect = 3e-10
Identities = 53/195 (27%), Positives = 80/195 (41%), Gaps = 5/195 (2%)
Frame = +3
Query: 9 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTE--VKSVEMHHEALQEAVPGDNVG 182
DV+ I G GTV GR+E G +K G V T V VEM + + +A+ GDNVG
Sbjct: 285 DVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAGDNVG 344
Query: 183 FNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIS---NGYTPVLDCHTA 353
++ + ++ RG V + P D V+ + G+ S GY P T
Sbjct: 345 LLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKDEGGRHSPFFPGYRPQFYMRTT 404
Query: 354 HIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPXLGRFAV 533
+ +I D + K GD + + +P+ E RFA+
Sbjct: 405 DVTGNVTKIMNDKD--------EEAKMCMPGDRVKMVVELIQPVACEQGM------RFAI 450
Query: 534 RDMRQTVAVGVIKAV 578
R+ +TV GVI +
Sbjct: 451 REGGKTVGAGVINTI 465
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 57.2 bits (132), Expect = 1e-08
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
Frame = +3
Query: 9 DVYKIGGIGTVPVGRVETGILKPG---TVVVFAPAN-ITTEVKSVEMHHEALQEAVPGDN 176
DV+ I G GTV GRVE G +K G ++ P+ + T V VEM + L GDN
Sbjct: 274 DVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAGDN 333
Query: 177 VGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAH 356
VG ++ + +++RG V K + F A++ VL +T L ++
Sbjct: 334 VGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLTK--DEGGRHTAFLSNYSPQ 389
Query: 357 IACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPXLGRFAVR 536
+ A++ KV D + + GD P+ +E Q RFA+R
Sbjct: 390 FYFRTADVTGKV------VLPDGVEMVMPGDNVTAGFELISPVPLEPGQ------RFALR 437
Query: 537 DMRQTVAVGVIKAV 578
+ +TV GV+ V
Sbjct: 438 EGGRTVGAGVVSKV 451
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +3
Query: 45 VGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 224
+G + + P T+V +P T KSVE +E L A G ++G + +
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIGNKIGQGGFGAVYYA 311
Query: 225 YVAGDS---KNNPPRGAADFTAQVIVLNH 302
+ G+ K + +F A++ VL H
Sbjct: 312 ELRGEKAAIKKMDMQATHEFLAELKVLTH 340
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 515 GWEFL-EGLHTQGLGGNQVDNGGITRFNGF 429
G E+L EG + GGN +DN G+T +N F
Sbjct: 365 GMEYLFEGCSSITEGGNSMDNSGVTEYNLF 394
>11_06_0516 + 24502645-24504507
Length = 620
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +3
Query: 129 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 308
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 309 QISNG 323
+I G
Sbjct: 170 EIRRG 174
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 278 SASHCAKS--PRSNIKRIHTCIGLPHSPHSL 364
S+S CA + P NI RIH IGL SP L
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIGLARSPAHL 126
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -3
Query: 451 ASPDLMDLGLSSVDLPVRRSTFSL 380
A+ DLM G+S V+LPVRR+ F++
Sbjct: 580 ATLDLMYSGISMVNLPVRRNHFAV 603
>02_05_1202 + 34932291-34933027,34933297-34933774
Length = 404
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Frame = +3
Query: 3 TRDVYKIGGI-GTVPVGRVETGI------LKPGTVVVFAPANITTEVKSVEMHHEALQEA 161
TRD+Y++ G+ GT + + G L PG ++ PA+ + E EAL +
Sbjct: 324 TRDIYQMPGVAGTCDMAAIADGYFGALFPLNPGGILPLVPASCSPEALLEPHGREALSSS 383
Query: 162 VPGDNVG 182
D G
Sbjct: 384 AAADAGG 390
>09_04_0281 -
16360082-16361059,16361608-16361688,16363287-16363650,
16363675-16364348
Length = 698
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = +2
Query: 539 HEADGR-RRC---NKGCELQGSRWWQSHQSCRKSH-QWQ 640
H+ GR ++C +GC Q W H+ CR H WQ
Sbjct: 412 HDGFGRLQQCPSQQEGCPSQQDDWHLQHEGCRLQHDDWQ 450
>06_03_1311 -
29241884-29242054,29242802-29242879,29242968-29243049,
29243141-29243212,29243316-29243437,29243541-29243596,
29244264-29244333,29244435-29244518,29244599-29244667,
29244855-29244928,29245014-29245125,29245220-29245510
Length = 426
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 373 PKSKRKSTVVLVNQQRTTLNPLNLVMP 453
P+ R+S + Q TT++P NLV+P
Sbjct: 103 PRRNRRSPALRAAFQETTISPANLVLP 129
>03_03_0225 - 15587557-15588774
Length = 405
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 68 PKAWYCCRFCPC*HHY*SQVRGNAPRGSTRSCTR 169
P+ W C FC H Y ++ G A + SC +
Sbjct: 167 PEFWTACPFCSYVHQYQRELVGRALKCPNESCRK 200
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -3
Query: 286 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 143
+ + A P G + RR L D+FL LK L PG+ + S
Sbjct: 274 SASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTS 321
>11_06_0596 + 25385744-25388890
Length = 1048
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 376 KSKRKSTVVLVNQQRTTLNPLNLVMPPLSTW 468
K+ K +N+ TTL L++ M P+S+W
Sbjct: 832 KANLKDLFAQINKLHTTLRSLSIRMKPVSSW 862
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 372 QICRLCGLCGNPIQVCI 322
QIC +C CG P VCI
Sbjct: 74 QICAVCTCCGGPHGVCI 90
>09_04_0749 + 19919367-19920869
Length = 500
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 39 VPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF-NVKNVSV 206
VPVG + + PG V ++ T + + + HH +++ + VG NV +V V
Sbjct: 161 VPVGEADGPLRLPGLPVELDAGDVPTFLAAHDTHHPSMRALLMNQFVGLDNVDHVFV 217
>04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888
Length = 748
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 216 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGY 326
RRG +++ PR +A + QV+ HP +S GY
Sbjct: 175 RRGSNCVENRRRKPRSSAQSSPQVVTPRHP--VSEGY 209
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,426,361
Number of Sequences: 37544
Number of extensions: 475569
Number of successful extensions: 1528
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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