Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_M19
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          27   0.13 
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          26   0.23 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    26   0.31 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   1.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   1.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   3.8  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 271 RRTARHHHPHCRPHSALQTRSLLHQI 348
           R++   HH + RPH++L TR  L ++
Sbjct: 115 RKSVVFHHDNARPHTSLVTRQKLLEL 140


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 253 RFGQETRRTARHHHPHCRPHSALQTRSLLHQI 348
           RF    R+    HH   RPH+ L TR  L ++
Sbjct: 110 RFELTNRKGVVFHHDDARPHTYLVTRQKLLEL 141


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 271 RRTARHHHPHCRPHSALQTRSLLHQI 348
           R+    HH + RPH++L TR  L ++
Sbjct: 237 RKGVVFHHDNARPHTSLVTRQKLLEL 262


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 100 WWWDMDVDVLLYD 62
           WWW+M +  L +D
Sbjct: 366 WWWNMKISNLSFD 378


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 323 WRAEWGRQWGW 291
           W   WG QWG+
Sbjct: 285 WLVNWGEQWGF 295


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +1

Query: 157 LQDHLH*GTGTSRARGTHHSRSCPKRREDPRLRFGQETR 273
           ++ HL  G G   A G       P+++++  +  G+E++
Sbjct: 188 VEAHLRKGRGAIGAYGPEKGPKVPEKKKEDEIDEGKESK 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,941
Number of Sequences: 438
Number of extensions: 1085
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)