Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_M18
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 35 0.012
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 34 0.021
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 31 0.11
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 30 0.26
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 30 0.34
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 28 1.1
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 27 3.2
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 27 3.2
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 3.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.2
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 26 4.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.2
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 26 5.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 5.6
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 7.4
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 25 7.4
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 25 7.4
SPBC646.03 |||glutamyl-tRNA amidotransferase|Schizosaccharomyces... 25 7.4
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 34.7 bits (76), Expect = 0.012
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 9/219 (4%)
Frame = +3
Query: 12 NSTHDSRGSTHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQET--TSESHIQXXXXX 185
+S+ S ST + +S++ + S+ + + S T +S S
Sbjct: 297 SSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFS 356
Query: 186 XXXXXXXXSDNVNSRITQHSTSNNQDIKQSGTHTQRVVSSD-HSGVNSSERYIVDNQSGH 362
S + +S ++ S++++ + S + + R SS HS SS + S
Sbjct: 357 STTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHK-----SSSS 411
Query: 363 NKNSATYITKGIHVEHNISKSTQHVTNKSLSDSVTK------TSIEFQRAMHGGDDSTTN 524
+K+S+ ++ + S+S+ H ++ SLS +K +S + H + ST
Sbjct: 412 SKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSKPILTASSSSLLTSSSHTYERSTVY 471
Query: 525 VDRSTRGGHHKRTSDLISDASSTNSVLHRKGLSSNTESS 641
V T +S S ++ T+ +L G SS+T+SS
Sbjct: 472 V--VTVETVSSGSSTYASQSTQTSILLVIVGDSSSTDSS 508
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 33.9 bits (74), Expect = 0.021
Identities = 37/210 (17%), Positives = 78/210 (37%)
Frame = +3
Query: 12 NSTHDSRGSTHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSESHIQXXXXXXX 191
+S S+ + + +N + S S + + S ++ SES +
Sbjct: 108 SSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSS 167
Query: 192 XXXXXXSDNVNSRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSSERYIVDNQSGHNKN 371
+ + S+S+++ S SSD +SSE + S + +
Sbjct: 168 SSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEG---SDSSSSSSS 224
Query: 372 SATYITKGIHVEHNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTTNVDRSTRGGH 551
S + + + + S ++ ++ SDS + +S + DS++N +
Sbjct: 225 SESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSN-SSDSEDDS 283
Query: 552 HKRTSDLISDASSTNSVLHRKGLSSNTESS 641
+SD S++SS +S S++ SS
Sbjct: 284 SSDSSDSESESSSEDSDSTSSSSDSDSSSS 313
Score = 33.9 bits (74), Expect = 0.021
Identities = 39/197 (19%), Positives = 79/197 (40%), Gaps = 3/197 (1%)
Frame = +3
Query: 12 NSTHDSRG-STHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSESHIQXXXXXX 188
+S+ DS S+ +D+S++ + S+ S++ + S E++SE +
Sbjct: 184 SSSSDSESESSSEDSDSSSSSSDSESESSSEGS-DSSSSSSSSESESSSEDNDSSSSSSD 242
Query: 189 XXXXXXXSDNVNSRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSSERYIVDNQSGHNK 368
D+ +S + S S + K S + + S D S +SS+ + +
Sbjct: 243 SESESSSEDSDSSSSSSDSESESSS-KDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDS 301
Query: 369 NSATYITKGIHVEHNISKSTQHVTNKSLS--DSVTKTSIEFQRAMHGGDDSTTNVDRSTR 542
S++ + + + +T T+ +S S TS E ++ D S + D+S +
Sbjct: 302 TSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIH-DKSLK 360
Query: 543 GGHHKRTSDLISDASST 593
H S + +S T
Sbjct: 361 RKHEDDESSTSTKSSRT 377
Score = 31.1 bits (67), Expect = 0.15
Identities = 40/201 (19%), Positives = 83/201 (41%)
Frame = +3
Query: 39 THRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSESHIQXXXXXXXXXXXXXSDN 218
T + SN+ +S++ + H+ S+ ++S+ S +
Sbjct: 72 TKESLEKSNDDSQKISKKGAPPEKA-HSSSEASGSGSSSDESDSSSSESESSSEDNDSSS 130
Query: 219 VNSRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSSERYIVDNQSGHNKNSATYITKGI 398
+S S+S + D S + ++ SS+ S +SS S + +S++ +
Sbjct: 131 SSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDS- 189
Query: 399 HVEHNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTTNVDRSTRGGHHKRTSDLIS 578
+ S S ++ S SDS +++S E G DS+++ S +S +
Sbjct: 190 ---ESESSSEDSDSSSSSSDSESESSSE-------GSDSSSSSSSS-----ESESSSEDN 234
Query: 579 DASSTNSVLHRKGLSSNTESS 641
D+SS++S + S +++SS
Sbjct: 235 DSSSSSSDSESESSSEDSDSS 255
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 31.5 bits (68), Expect = 0.11
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Frame = +3
Query: 417 SKSTQHVTNKSLSDSVTKTS-----IEFQRAMHG-GDDSTTNVDRSTRGGHHKRTSDLIS 578
SKS +V+NK L D + +++ ++ +H D++ +R ++ H T DLIS
Sbjct: 117 SKSLSNVSNKPLGDQLFRSNSLMSPSLLKKELHRIQSDASQANERESQAPHSFVTHDLIS 176
Query: 579 DASSTNSVLHRKGLSSNTE 635
+ NS+ H S TE
Sbjct: 177 SSKDGNSLTHEFANDSVTE 195
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 30.3 bits (65), Expect = 0.26
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 646 NGELSVFELRPLRCKTELVEEASEIRSDVRLWWPP 542
+G++ VF + L+ TE + +R D R WW P
Sbjct: 545 HGKIVVFGEKRLQALTEKFKNGQLVRRDYRYWWTP 579
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 29.9 bits (64), Expect = 0.34
Identities = 40/189 (21%), Positives = 71/189 (37%), Gaps = 15/189 (7%)
Frame = +3
Query: 117 HAVSQQHHQETTSESHIQXXXXXXXXXXXXXSDNVNSRITQHSTSNNQDIKQSGTHTQRV 296
+++S H E+T I VN +TQ N+Q S T +Q
Sbjct: 171 YSISSNHDNESTLTEGIALKEIESPDKDRKADGIVNLSVTQEEDDNHQSFNSSLTPSQPT 230
Query: 297 V-------SSDHSGVNSSERYIVDNQSGHNKNSATYITKGIHVEHNI------SKSTQHV 437
S + + +SS + S ++ + VEH+ S++ +
Sbjct: 231 TYNRANFFSINDASSDSSSDAPLRTLSSPSRLRMKDNDRKYLVEHSPAALIKESETIDGI 290
Query: 438 TNKSLSDSVTKTSIEFQRAMHGGDDSTTNV--DRSTRGGHHKRTSDLISDASSTNSVLHR 611
+KSL S + S+E DDS+++V ++ T H R +I +S++
Sbjct: 291 DDKSLRSSTREVSVESPNEDSVNDDSSSDVSDEKETEAKHEIRAPAIIVRETSSHPSTAV 350
Query: 612 KGLSSNTES 638
+ TES
Sbjct: 351 PSENDTTES 359
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/98 (22%), Positives = 46/98 (46%)
Frame = +3
Query: 345 DNQSGHNKNSATYITKGIHVEHNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTTN 524
+N S + +S ++ +++ + SK V+ +S++ S +F + G +
Sbjct: 114 NNSSRRSSSSVGKLSNVSNMQSSPSKDP-FVSQDYEKESIS--SSQFSKKYSEGSLKSQQ 170
Query: 525 VDRSTRGGHHKRTSDLISDASSTNSVLHRKGLSSNTES 638
+ + H K+ +D S+ASS++SV+ L N S
Sbjct: 171 SNTRSNSVHEKQNTDHASNASSSSSVVSSPSLKPNNTS 208
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 26.6 bits (56), Expect = 3.2
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +3
Query: 327 SERYIVDNQSGHNKNSATYITKGIHVEHNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGG 506
SER + + S N N A I +H I + V + + + + S+E +
Sbjct: 811 SERVLRKDNSSRNGNEAEDIPARDRKKHKIHDKGKKVNSSKVFEKMGIASMEKYKPPQES 870
Query: 507 DDSTTNVDRSTRGGHHKRTSDLISDASSTNSVLHRKGL-SSNTES 638
+ + TN D + G D+ + A +++ H + +S TES
Sbjct: 871 NVTKTNSDSTL--GDDSVLDDIFASAGIQSTLKHDDIMEASQTES 913
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 26.6 bits (56), Expect = 3.2
Identities = 18/88 (20%), Positives = 35/88 (39%)
Frame = +3
Query: 57 NSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSESHIQXXXXXXXXXXXXXSDNVNSRIT 236
N+NN ++ S N ++ +QQH Q ++S + + N+
Sbjct: 562 NNNNNNNSNSGNYNNNNSGNN--NQQHQQSSSSLQGLASSFLNSSSGNSNKQNYNNNNNQ 619
Query: 237 QHSTSNNQDIKQSGTHTQRVVSSDHSGV 320
+ +NNQ+ + +Q S SG+
Sbjct: 620 NYGNNNNQNYNNNNNSSQGGNSQGGSGL 647
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 3.2
Identities = 25/127 (19%), Positives = 50/127 (39%)
Frame = +3
Query: 12 NSTHDSRGSTHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSESHIQXXXXXXX 191
+S S+ S + S+ Q ++ S T + ++S S S
Sbjct: 496 SSVQSSQSSQFTVSVPSSTQSYSTSSNFTTPITISTSLSS-FPTTIVSSSFQYSSLSSNV 554
Query: 192 XXXXXXSDNVNSRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSSERYIVDNQSGHNKN 371
S +++S + T + I SG+ + S+ S +NSS + + S +
Sbjct: 555 TTTNAQSSSLSSSNSSALTHISSSIVSSGSSSALSSSTIVSSINSSSSVFISSVSSSLQY 614
Query: 372 SATYITK 392
S++Y+T+
Sbjct: 615 SSSYVTE 621
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.2
Identities = 31/139 (22%), Positives = 60/139 (43%)
Frame = +3
Query: 225 SRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSSERYIVDNQSGHNKNSATYITKGIHV 404
S IT HS+ + + S V SS +SS + S S+T ++ ++
Sbjct: 714 SNIT-HSSLSLTAMSSSSAIPTSVNSSTLITASSSNTLLSSITSSSAIVSSTTVS---NI 769
Query: 405 EHNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTTNVDRSTRGGHHKRTSDLISDA 584
N+ +T ++ + S TS+ + +++ + +T H T + +
Sbjct: 770 SSNLPSATASSQSQLTNSSTLATSLYLSSSSSRTISTSSTNEYNT--SFHAPTVSSTTSS 827
Query: 585 SSTNSVLHRKGLSSNTESS 641
SST S+ KG++SN+ +S
Sbjct: 828 SSTTSLAANKGVNSNSITS 846
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 26.2 bits (55), Expect = 4.2
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 243 STSNNQDIKQSGTHTQRVVSSDHSGVNS---SERYIVDNQSGHNKNSATYITKGIHVEHN 413
+T N D H R SS HS NS ++ V + + K A H +
Sbjct: 14 NTLGNNDENHPSNHIARAKSSLHSSENSLVNGKKATVSSTNVPKKRHALDDVSNFHNKEG 73
Query: 414 ISKSTQHVTNKSLSDSV-TKTSIEFQRAMHGGDDSTTNVDR 533
+ ++++ + + SV T+ ++E + + DD + R
Sbjct: 74 VPLASKNTNVRHTTASVSTRRALEEKSIIPATDDEPASKKR 114
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 4.2
Identities = 26/163 (15%), Positives = 56/163 (34%)
Frame = +3
Query: 153 SESHIQXXXXXXXXXXXXXSDNVNSRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSSE 332
S S S + S S++ + + S T + + SS + + +
Sbjct: 82 SSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLAS 141
Query: 333 RYIVDNQSGHNKNSATYITKGIHVEHNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDD 512
I + + +++ + + T T+ SLS + S +
Sbjct: 142 SSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLN 201
Query: 513 STTNVDRSTRGGHHKRTSDLISDASSTNSVLHRKGLSSNTESS 641
STT+ ++ S+ + +S +S L+ ++ T SS
Sbjct: 202 STTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSS 244
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 37 VLIVIQITATIKDT-HYHSNLLRINWLIMQCLSNITKKQHLKATF 168
++++ Q + D H+ N + + L+M ++N+ K Q++ ATF
Sbjct: 168 IMVLFQPALLLIDHGHFQYNCVMLG-LVMYAIANLLKNQYVAATF 211
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/65 (23%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 417 SKSTQHVTNKSLSDSV-TKTSIEFQRAMHGGDDSTTNVDRSTRGG-HHKRTSDLISDASS 590
S ++ T+ S++ + +TS+ ++ +++T+ +S++ G HH ++ +D+SS
Sbjct: 1261 SNASPSPTSSSMASAAPARTSVSRSKSKAERHETSTSSRKSSKSGEHHHHHNEGHADSSS 1320
Query: 591 TNSVL 605
T + L
Sbjct: 1321 TRTSL 1325
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 210 NEFHSLLLSFRYFVECGFQMLFLGDVAETLHDQPI 106
NE H LL+ R + C F L L V E P+
Sbjct: 1016 NEIHGKLLTIRAVLSCFFSKLTLQQVQEFYEVVPL 1050
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 534 STRGGHHKRTSDLISDASSTNSVLHRKGLSSNTES 638
ST K+ D AS T+ LHR+ LSSNT +
Sbjct: 91 STSNTPTKKKKDSFDHASVTS--LHRRSLSSNTST 123
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 24 DSRGSTHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQE 146
DS +H N +N+ +SQ + L +H SQQH Q+
Sbjct: 681 DSYDELEQHHANFHNKAG-ISQSNIPPHLQEHRQSQQHFQQ 720
>SPBC646.03 |||glutamyl-tRNA amidotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 471
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 303 SDHSGVNSSERYIVDNQSGHNKNSATYITKGIHVEHNISKSTQHVTNK 446
+D + + RY V Q H K S I GI ++ N+S++ +V +K
Sbjct: 223 NDSTCLTKEARYFVKEQ--HKKLSRKPIKIGIPIDWNVSETHPNVLDK 268
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,775,998
Number of Sequences: 5004
Number of extensions: 58553
Number of successful extensions: 229
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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