Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_M16
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   0.84 
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   2.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.5  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 26.2 bits (55), Expect = 0.84
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -1

Query: 358 PGNHGKLHRLSVAYRTHSLARVVSD--YRSLMYKHIFFGVIPIDETISTLDVEP 203
           PG+HG  H +  A  T     +  +  YR+   +H+  G   IDE +  + V P
Sbjct: 392 PGSHGSFHEIGRAMATLMSDEIFHEVAYRAKRREHLLAG---IDEFLDAVTVLP 442


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -1

Query: 559 PLCTPLIGWRSTAPDTTS--AWG 497
           P+   L+GWR  +PD ++   WG
Sbjct: 7   PIVKRLLGWRKVSPDDSAEGKWG 29


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 547 PLIGWRSTAPDTTSAWGSFTTTSPT 473
           P I W +  P ++ A+ S T   PT
Sbjct: 230 PSISWSTADPSSSPAYSSITHYEPT 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,297
Number of Sequences: 2352
Number of extensions: 9526
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)