Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_M15
         (794 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    27   0.15 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    26   0.35 
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   3.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   3.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   3.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   3.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.7  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
 Frame = -1

Query: 686 NHFNSKNTLCNTCSYFFYGK----LHLLSLHYVYTHTFA*C 576
           NHF SK   C  CSY    K     HL S   VY +  A C
Sbjct: 10  NHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANC 50


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -2

Query: 472 ITSGFSKVYKNIVLKHWL 419
           I +GFSK+ +N++ K+WL
Sbjct: 422 INAGFSKIAENLLEKNWL 439


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 299 SLNCFIFNNSLNVISNYYTIKDKKNCQKFNFQINF 195
           SL+    +N+ N   NY       NC+K  + IN+
Sbjct: 84  SLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 299 SLNCFIFNNSLNVISNYYTIKDKKNCQKFNFQINF 195
           SL+    +N+ N   NY       NC+K  + IN+
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 299 SLNCFIFNNSLNVISNYYTIKDKKNCQKFNFQINF 195
           SL+    +N+ N   NY       NC+K  + IN+
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 299 SLNCFIFNNSLNVISNYYTIKDKKNCQKFNFQINF 195
           SL+    +N+ N   NY       NC+K  + IN+
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINY 118


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 284 IFNNSLNVISNYYTIKDKK 228
           I  N +  + NYY I+D K
Sbjct: 578 IHGNFIESLGNYYKIRDSK 596


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,606
Number of Sequences: 438
Number of extensions: 3166
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)