Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_M13
         (565 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    25   0.53 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      24   0.92 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   4.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   4.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   4.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.5  

>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 226 RTHSLNEENVSEKVEERDSGTESDDEADRVHS 321
           R HS NE+   E  + R+   E  + +DRV S
Sbjct: 57  RQHSKNEQQRKEMEQMREREREQREHSDRVTS 88


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +1

Query: 415 RRLPDPEPDHLYDHHSSEEELEVINGVPSGACGAGSAVGP 534
           RRL D  P  L DH   +E+   +   P      G  + P
Sbjct: 118 RRLHDNSPSFLSDHSRDQEQNLYLTPSPQMYSSGGEEITP 157


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 557 SPAQSTPGGPTAEPAPHAPLGTP 489
           +P + +P  P+  P P  P G P
Sbjct: 33  APQRGSPPNPSQGPPPGGPPGAP 55


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 557 SPAQSTPGGPTAEPAPHAP 501
           S + S PGG ++ P+P +P
Sbjct: 78  STSPSYPGGGSSSPSPSSP 96


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 324 TGVNAVCLVVRFGAGVPLLHLLGNVL 247
           T     C++ RFG GV    + G +L
Sbjct: 574 TPTTVTCILQRFGVGVSFSAVYGALL 599


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 209 NLSIIEPPLGRLVSRHSLH 153
           N+S+ EPPLG+ ++  SLH
Sbjct: 240 NISLDEPPLGKNLNL-SLH 257


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 324 TGVNAVCLVVRFGAGVPLLHLLGNVL 247
           T     C++ RFG GV    + G +L
Sbjct: 664 TPTTVTCILQRFGVGVSFSAVYGALL 689


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 462 FGRRIRGDQRRAERRMWRGLRCGTSW 539
           FG  +     R  R ++ G+R G SW
Sbjct: 671 FGSAVLLISDRLSRDLYCGIRAGLSW 696


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 462 FGRRIRGDQRRAERRMWRGLRCGTSW 539
           FG  +     R  R ++ G+R G SW
Sbjct: 709 FGSAVLLISDRLSRDLYCGIRAGLSW 734


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,331
Number of Sequences: 438
Number of extensions: 2670
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)