Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_M12
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   1.5  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   2.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.5  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   6.2  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   6.2  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   8.2  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = -2

Query: 480 TSAKMRIRIIPTNNLGCWAVPRT--PASPTMPMAKPAARPEKPTARPAPK 337
           TS   R  + P + L   A PR   P       +KP A P+  +A PAP+
Sbjct: 68  TSVDCRTSLAPCSKLFA-AEPRVALPKLSATGASKPIAEPKAASATPAPE 116


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 114 LPSSSAPLVLHMAQPSQAPVLP 179
           LP+++ P+  +M QPS  PV P
Sbjct: 808 LPATAEPMGDYMIQPSNIPVHP 829


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 627  CARIVTERRLIRFSSYRNPEHRRLELSVFRLVYCFVY 517
            C R    +R+ R S +   E +R E ++ RLV   VY
Sbjct: 1254 CHRFFDRKRIHRKSYFELRELKRAEKTIIRLVQNEVY 1290


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 477 RYWVYTGSSSPFTCTRSSKPT*THSTPVAGAPDSYT 584
           R+   T +S+P T ++ + PT T +TPV   P +++
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWS 165


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 477 RYWVYTGSSSPFTCTRSSKPT*THSTPVAGAPDSYT 584
           R+   T +S+P T ++ + PT T +TPV   P +++
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWS 165


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 408 ASPTMPMAKPAARPEKPTARPAP 340
           A   M +  PAA    PTA P P
Sbjct: 67  AEAAMDLEPPAAAQPTPTASPVP 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,793
Number of Sequences: 2352
Number of extensions: 17970
Number of successful extensions: 105
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 105
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)