Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_M12
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 222 2e-58
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 222 2e-58
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 222 2e-58
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 222 2e-58
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 206 1e-53
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 206 1e-53
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 85 4e-17
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 85 4e-17
U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical pr... 34 0.075
U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical pr... 34 0.075
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 31 0.53
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 31 0.70
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 2.8
U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical p... 29 3.7
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 3.7
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 3.7
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 6.5
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 6.5
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 6.5
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 6.5
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 6.5
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 28 6.5
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 27 8.6
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 222 bits (542), Expect = 2e-58
Identities = 110/160 (68%), Positives = 125/160 (78%)
Frame = +2
Query: 44 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 223
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 224 PVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVG 403
PV+MAGII IYGLVVA+++ G + S Y L KGF HL AGL G GL AG+AIGIVG
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVG 120
Query: 404 DAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYT 523
DAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 121 DAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 34.3 bits (75), Expect = 0.075
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 329 FIHLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 502
F ++GA A F+ G A G A VG + +P L + ++ +I A ++G+YGL+
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 503 VAIYLYTK 526
VA+ L K
Sbjct: 75 VAMVLKGK 82
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +2
Query: 92 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 271
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 272 VLIAGS 289
+++ S
Sbjct: 156 LILGTS 161
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 222 bits (542), Expect = 2e-58
Identities = 110/160 (68%), Positives = 125/160 (78%)
Frame = +2
Query: 44 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 223
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 224 PVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVG 403
PV+MAGII IYGLVVA+++ G + S Y L KGF HL AGL G GL AG+AIGIVG
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVG 120
Query: 404 DAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYT 523
DAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 121 DAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 34.3 bits (75), Expect = 0.075
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 329 FIHLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 502
F ++GA A F+ G A G A VG + +P L + ++ +I A ++G+YGL+
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 503 VAIYLYTK 526
VA+ L K
Sbjct: 75 VAMVLKGK 82
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +2
Query: 92 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 271
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 272 VLIAGS 289
+++ S
Sbjct: 156 LILGTS 161
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 222 bits (542), Expect = 2e-58
Identities = 110/160 (68%), Positives = 125/160 (78%)
Frame = +2
Query: 44 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 223
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 224 PVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVG 403
PV+MAGII IYGLVVA+++ G + S Y L KGF HL AGL G GL AG+AIGIVG
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVG 120
Query: 404 DAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYT 523
DAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 121 DAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 34.3 bits (75), Expect = 0.075
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 329 FIHLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 502
F ++GA A F+ G A G A VG + +P L + ++ +I A ++G+YGL+
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 503 VAIYLYTK 526
VA+ L K
Sbjct: 75 VAMVLKGK 82
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +2
Query: 92 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 271
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 272 VLIAGS 289
+++ S
Sbjct: 156 LILGTS 161
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 222 bits (542), Expect = 2e-58
Identities = 110/160 (68%), Positives = 125/160 (78%)
Frame = +2
Query: 44 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 223
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 224 PVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVG 403
PV+MAGII IYGLVVA+++ G + S Y L KGF HL AGL G GL AG+AIGIVG
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVG 120
Query: 404 DAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYT 523
DAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 121 DAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 34.3 bits (75), Expect = 0.075
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 329 FIHLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 502
F ++GA A F+ G A G A VG + +P L + ++ +I A ++G+YGL+
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 503 VAIYLYTK 526
VA+ L K
Sbjct: 75 VAMVLKGK 82
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +2
Query: 92 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 271
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 272 VLIAGS 289
+++ S
Sbjct: 156 LILGTS 161
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 206 bits (502), Expect = 1e-53
Identities = 96/150 (64%), Positives = 119/150 (79%)
Frame = +2
Query: 68 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGII 247
E +YGPFFG +G SA+ F++ G+AYGTAK+GTGIA+MAV RP+ +MK+IIPVVMAGI+
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIV 76
Query: 248 AIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA 427
AIYGLVVAV+++G ++ NYT+ F GL G GL AG+AIGI GDAGVR +
Sbjct: 77 AIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALS 136
Query: 428 QQPRLFVGMILILIFAEVLGLYGLIVAIYL 517
QQPR+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 137 QQPRMFVGMILILIFAEVLGLYGMIVALIL 166
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 134 LGAAYGTAKSG-TGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIAGS 289
LGA Y +G G+ A++ +P + I+ ++ A ++ +YG++VA+++ +
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVALILGAT 169
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 206 bits (502), Expect = 1e-53
Identities = 96/150 (64%), Positives = 119/150 (79%)
Frame = +2
Query: 68 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGII 247
E +YGPFFG +G SA+ F++ G+AYGTAK+GTGIA+MAV RP+ +MK+IIPVVMAGI+
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIV 76
Query: 248 AIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA 427
AIYGLVVAV+++G ++ NYT+ F GL G GL AG+AIGI GDAGVR +
Sbjct: 77 AIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALS 136
Query: 428 QQPRLFVGMILILIFAEVLGLYGLIVAIYL 517
QQPR+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 137 QQPRMFVGMILILIFAEVLGLYGMIVALIL 166
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 134 LGAAYGTAKSG-TGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIAGS 289
LGA Y +G G+ A++ +P + I+ ++ A ++ +YG++VA+++ +
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVALILGAT 169
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 85.0 bits (201), Expect = 4e-17
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Frame = +2
Query: 101 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLI 280
+G ++ S LGA +G +G+ I V P K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 281 AGSL------DQPSNN-------YTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 421
G L D P L G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 422 TAQQPRLFVGMILILIFAEVLGLYGLIVAI 511
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +2
Query: 206 IMKSIIPVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFS----GL 373
I+K+ + + + I G + +++G + + L H+ AGL +GFS L
Sbjct: 6 ILKTTATLTVITTLIILGTGLFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVL 65
Query: 374 AAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 526
AG+ I G + + G + PR+ ++ +IF E + ++G+I+A K
Sbjct: 66 GAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVFVGK 116
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 85.0 bits (201), Expect = 4e-17
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Frame = +2
Query: 101 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLI 280
+G ++ S LGA +G +G+ I V P K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 281 AGSL------DQPSNN-------YTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 421
G L D P L G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 422 TAQQPRLFVGMILILIFAEVLGLYGLIVAI 511
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +2
Query: 206 IMKSIIPVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFS----GL 373
I+K+ + + + I G + +++G + + L H+ AGL +GFS L
Sbjct: 6 ILKTTATLTVITTLIILGTGLFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVL 65
Query: 374 AAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 526
AG+ I G + + G + PR+ ++ +IF E + ++G+I+A K
Sbjct: 66 GAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVFVGK 116
>U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical
protein K05F1.6b protein.
Length = 627
Score = 34.3 bits (75), Expect = 0.075
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 215 SIIPVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIG 394
S+ V MA + YGLV+A+ DQ + TL+ G+ HL G+A G + FA
Sbjct: 342 SVCIVFMATALVYYGLVMALS-----DQSAPGRTLFTGYFHLNNGIA-GAIEIPTLFACV 395
Query: 395 IVGDAGVRGTAQQPRLFVGM-ILILIFAEVLGLYGLIVAIYLYTK 526
+ G + + G+ I++ + + V G Y L +A + K
Sbjct: 396 WMMQLGRKKALMLTLITSGLFIIVAMLSMVSGHYMLALAFMYFGK 440
>U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical
protein K05F1.6a protein.
Length = 773
Score = 34.3 bits (75), Expect = 0.075
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 215 SIIPVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIG 394
S+ V MA + YGLV+A+ DQ + TL+ G+ HL G+A G + FA
Sbjct: 488 SVCIVFMATALVYYGLVMALS-----DQSAPGRTLFTGYFHLNNGIA-GAIEIPTLFACV 541
Query: 395 IVGDAGVRGTAQQPRLFVGM-ILILIFAEVLGLYGLIVAIYLYTK 526
+ G + + G+ I++ + + V G Y L +A + K
Sbjct: 542 WMMQLGRKKALMLTLITSGLFIIVAMLSMVSGHYMLALAFMYFGK 586
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1
Query: 289 GTCNQDSYDQSVDGNDTRHDNGNDGF 212
G NQDSYDQ GND +D GN G+
Sbjct: 345 GNANQDSYDQ---GNDYGNDYGNAGY 367
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = -2
Query: 489 RPNTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAARPEKPTARP 346
RP T A R+R P L PR P T A P +RP T RP
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = -2
Query: 489 RPNTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAARPEKPTARP 346
RP T A R+R P L PR P T A P +RP T RP
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2
Query: 417 RTPASPTMPMAKPAARPEKPTARPAPK 337
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 423 VPRTPASPTMPMAKPAARPE-KPTARPAPK 337
VP P PT P +P RPE +P +P P+
Sbjct: 96 VPPPPPPPTQPEPEPEPRPEPQPEPQPEPQ 125
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2
Query: 417 RTPASPTMPMAKPAARPEKPTARPAPK 337
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical
protein K06C4.8 protein.
Length = 355
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/31 (32%), Positives = 23/31 (74%)
Frame = +2
Query: 458 LILIFAEVLGLYGLIVAIYLYTKQ*TNLNTL 550
+I++ ++G++G I++IY+Y++ N NT+
Sbjct: 24 MIMLPLILIGIFGNIISIYVYSRHHMNKNTI 54
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 420 PRTPASPTMPMAKPAARPEKPTARPAPK 337
P P +P P AKP RP + + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 420 PRTPASPTMPMAKPAARPEKPTARPAPK 337
P P +P P AKP RP + + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 151 HSQVRHRYCRHGGDAA*ADHEIHHS-RCHGGYHCH 252
H + H HGG +E HH HGG+H H
Sbjct: 50 HHEESHHGEHHGGHHGVQHYESHHESHHHGGHHGH 84
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 420 PRTPASPTM--PMAKPAARPEKPTARPAPK 337
PRTP +P + P +P A +P A P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 420 PRTPASPTM--PMAKPAARPEKPTARPAPK 337
PRTP +P + P +P A +P A P P+
Sbjct: 434 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 463
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 420 PRTPASPTM--PMAKPAARPEKPTARPAPK 337
PRTP +P + P +P A +P A P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 420 PRTPASPTM--PMAKPAARPEKPTARPAPK 337
PRTP +P + P +P A +P A P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 420 PRTPASPTMPMAKPAARPEK--PTARPAPK*MNP 325
P PA P+MP + A+PE P P P P
Sbjct: 562 PSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQP 595
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 411 PASPTMPMAKPAARPEKPTARPAPK 337
P+S +P A+P+A KP +P PK
Sbjct: 668 PSSSEVPPAEPSAPEPKPAPKPDPK 692
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 420 PRTPASPTMPMAKPAARPEKPTARPAPK 337
P P SP+ P P +RP++P P+
Sbjct: 36 PPRPPSPSRPQRPPPSRPQRPPPPRQPR 63
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 411 PASPTMPMAKPAARPEKPTARPAP 340
P P M PAA P P RP P
Sbjct: 33 PQKPVTTMRTPAATPAAPPTRPTP 56
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 411 PASPTMPMAKPAARPEKPTARPAP 340
P P M PAA P P RP P
Sbjct: 162 PQKPVTTMRTPAATPAAPPTRPTP 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,651,503
Number of Sequences: 27780
Number of extensions: 401418
Number of successful extensions: 1380
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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