Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_M11
         (490 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   5.3  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   9.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.3  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 132 YRGGQSVGSLASRAYHRL 79
           Y G +S  SL ++A+HRL
Sbjct: 54  YSGTRSSESLTAQAHHRL 71


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -3

Query: 485 PRVAARASSPLHNTVPRRITPHRALTNRPQNEYRHFIDN 369
           P +    +  LH ++   +T  +  T     E+R F+DN
Sbjct: 246 PPLGKNLNLSLHASLNHTLTKDQPETYELVKEWRDFVDN 284


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 237 RCRLSARMSADLASGRPQPAPRHATPHRITTRCLRPR 347
           R R  A+  A+  + RP   P+   PH    R   P+
Sbjct: 31  RLRREAKPEAEPGNNRPIYIPQPRPPHPRLRREAEPK 67


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = -2

Query: 483 ARRRTRLVSAAQYSAAPHHTAPRPNKPTAKRISTLYR*QSAFRITVEGED 334
           A +R R  +   Y A P+     PN+P+A+  +T  +         E ED
Sbjct: 203 AAKRMRPAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFESED 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,689
Number of Sequences: 438
Number of extensions: 2183
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)