Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_M08
(543 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p pro... 143 1e-34
AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-P... 143 1e-34
AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-P... 105 4e-23
AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-P... 33 0.19
BT003194-1|AAO24949.1| 371|Drosophila melanogaster RE59468p pro... 31 1.0
AF199369-2|AAF09580.1| 318|Drosophila melanogaster MEI-P22 prot... 31 1.3
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 30 1.8
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 30 1.8
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 30 1.8
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 30 1.8
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 30 1.8
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 30 1.8
AE014296-3678|AAF51833.3| 583|Drosophila melanogaster CG12377-P... 29 5.4
AE014296-1215|AAF50593.2| 331|Drosophila melanogaster CG14827-P... 29 5.4
>AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p
protein.
Length = 262
Score = 143 bits (347), Expect = 1e-34
Identities = 72/146 (49%), Positives = 89/146 (60%)
Frame = +3
Query: 105 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 284
N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 285 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 464
K+ YPT+ ++ R +FS+H R TR NLTPGTV ILLAGRH GKR
Sbjct: 83 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142
Query: 465 XXFTGPFAFNACPLRRIPQRYVIGTS 542
TGPFA N+CPLRR+ QRYVIGTS
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTS 168
>AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-PB,
isoform B protein.
Length = 262
Score = 143 bits (347), Expect = 1e-34
Identities = 72/146 (49%), Positives = 89/146 (60%)
Frame = +3
Query: 105 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 284
N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 285 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 464
K+ YPT+ ++ R +FS+H R TR NLTPGTV ILLAGRH GKR
Sbjct: 83 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142
Query: 465 XXFTGPFAFNACPLRRIPQRYVIGTS 542
TGPFA N+CPLRR+ QRYVIGTS
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTS 168
>AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-PA,
isoform A protein.
Length = 243
Score = 105 bits (252), Expect = 4e-23
Identities = 62/146 (42%), Positives = 82/146 (56%)
Frame = +3
Query: 105 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 284
N L G+LR+SK++MY ++A+Y+ + VV++ V +K
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA---------KVPIK 63
Query: 285 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 464
K+ YPT+ ++ R +FS+H R TR NLTPGTV ILLAGRH GKR
Sbjct: 64 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 123
Query: 465 XXFTGPFAFNACPLRRIPQRYVIGTS 542
TGPFA N+CPLRR+ QRYVIGTS
Sbjct: 124 LLVTGPFALNSCPLRRVSQRYVIGTS 149
>AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-PB,
isoform B protein.
Length = 1346
Score = 33.5 bits (73), Expect = 0.19
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 73 VSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYI-SLSVRRTRKLKSPRNQPSWLSK*AV 249
+S S AN+ I S T S SP+AG L I SL +R+ + + P +SK V
Sbjct: 1104 ISESPNAANKVIEASPTAASPSPRAGHEASHLRIRSLRIRKVASTSTSQTTPKPVSKRKV 1163
Query: 250 KRMEALVQSC*KAGNHSTPLRTRS 321
+E +++ K +P + S
Sbjct: 1164 VHLETPLRNGRKRVLRRSPSNSNS 1187
>BT003194-1|AAO24949.1| 371|Drosophila melanogaster RE59468p
protein.
Length = 371
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 452 QHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAMRTTPDLVLS 306
+H NEH + + R+ N++ + +VRS P +F TPD LS
Sbjct: 323 RHVNEHQGVLPFTKRKYNSYTS-LQVRSTPMPIFNHPNGFANTPDAFLS 370
>AF199369-2|AAF09580.1| 318|Drosophila melanogaster MEI-P22 protein
protein.
Length = 318
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = -3
Query: 523 RCGIRRRGHALKAKGPVK------SSRPLGNTPTSTTRLPACLPANRMHTVP 386
+C ++RG K K P K S+ LGNTP S ++LPA PA+ +H +P
Sbjct: 149 QCTPKKRGR--KPKQPAKKLQSRISTDQLGNTP-SPSKLPAKYPAHFVHQLP 197
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 31 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 210
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3666 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3724
Query: 211 --PRNQ 222
PRNQ
Sbjct: 3725 YQPRNQ 3730
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 31 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 210
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3672 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3730
Query: 211 --PRNQ 222
PRNQ
Sbjct: 3731 YQPRNQ 3736
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 31 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 210
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3615 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3673
Query: 211 --PRNQ 222
PRNQ
Sbjct: 3674 YQPRNQ 3679
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 31 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 210
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3615 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3673
Query: 211 --PRNQ 222
PRNQ
Sbjct: 3674 YQPRNQ 3679
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 31 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 210
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3672 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3730
Query: 211 --PRNQ 222
PRNQ
Sbjct: 3731 YQPRNQ 3736
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 31 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 210
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3672 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3730
Query: 211 --PRNQ 222
PRNQ
Sbjct: 3731 YQPRNQ 3736
>AE014296-3678|AAF51833.3| 583|Drosophila melanogaster CG12377-PA
protein.
Length = 583
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 523 RCGIRRRGHALKAKGPVKSSRPLGNTPTSTTRLP 422
R +R H + K P + RP+ N P STT LP
Sbjct: 348 RSSLRPPQHTKQPKHPRHALRPVCNPPPSTTTLP 381
>AE014296-1215|AAF50593.2| 331|Drosophila melanogaster CG14827-PA
protein.
Length = 331
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = -3
Query: 523 RCGIRRRGHALKAKGPVK------SSRPLGNTPTSTTRLPACLPANRMHTVP 386
+C ++RG K K P K S+ LG+TP S ++LPA PA+ +H +P
Sbjct: 149 QCTPKKRGR--KPKQPAKKLQSRISTDQLGSTP-SPSKLPAKYPAHFVHQLP 197
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,153,944
Number of Sequences: 53049
Number of extensions: 578424
Number of successful extensions: 1827
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1825
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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