Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_M07
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...   122   3e-28
Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...   120   1e-27
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...   120   1e-27
Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical pr...    44   1e-04
U40412-2|ABN43089.1|  160|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score =  122 bits (293), Expect = 3e-28
 Identities = 59/72 (81%), Positives = 63/72 (87%), Gaps = 2/72 (2%)
 Frame = +1

Query: 1   SVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQG 180
           SVF+YEILN+PDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD   
Sbjct: 177 SVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAAT 236

Query: 181 DGDE--PAEGGD 210
           D  +    EGG+
Sbjct: 237 DDTDANETEGGN 248


>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score =  120 bits (288), Expect = 1e-27
 Identities = 58/68 (85%), Positives = 61/68 (89%)
 Frame = +1

Query: 1   SVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQG 180
           SVFYYEILN+P+ ACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD  G
Sbjct: 176 SVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-G 234

Query: 181 DGDEPAEG 204
             D+  EG
Sbjct: 235 AEDQEQEG 242


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score =  120 bits (288), Expect = 1e-27
 Identities = 58/68 (85%), Positives = 61/68 (89%)
 Frame = +1

Query: 1   SVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQG 180
           SVFYYEILN+P+ ACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD  G
Sbjct: 176 SVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-G 234

Query: 181 DGDEPAEG 204
             D+  EG
Sbjct: 235 AEDQEQEG 242


>Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical
           protein F52D10.3b protein.
          Length = 198

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = +1

Query: 1   SVFYYEILNSPDKACQLAKQ 60
           SVF+YEILN+PDKACQLAKQ
Sbjct: 177 SVFFYEILNAPDKACQLAKQ 196


>U40412-2|ABN43089.1|  160|Caenorhabditis elegans Hypothetical
           protein F46G11.6 protein.
          Length = 160

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/64 (28%), Positives = 26/64 (40%)
 Frame = +2

Query: 287 SNIREGREPRPRALASAADATRRL*KNIMLKMSFTADLHVPSKIKCYVSSLTVLYFCIYT 466
           S+   G +P P            L KN+     F A +  P  I+   SS  V+ FC+ T
Sbjct: 86  SSDEPGFQPYPIIDDMGCSLEESLFKNVQYPNHFEAGIFNPFPIRFRASSAAVVLFCVTT 145

Query: 467 GLQI 478
            + I
Sbjct: 146 VVPI 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,950,672
Number of Sequences: 27780
Number of extensions: 148437
Number of successful extensions: 326
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)