Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_M06
(654 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 24 1.1
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 3.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 4.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 4.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 4.5
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 6.0
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 7.9
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 7.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 7.9
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 7.9
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/39 (23%), Positives = 26/39 (66%)
Frame = +1
Query: 298 QTSVFKQEREEPEKIKIWREEQKQRLEEKDAEEERKKQE 414
Q S +Q+R+E E+++ EQ++ + +++++++Q+
Sbjct: 58 QHSKNEQQRKEMEQMREREREQREHSDRVTSQQQQQQQQ 96
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.6 bits (46), Expect = 3.4
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +3
Query: 3 TRVIVFLICYFC 38
T ++V+++CYFC
Sbjct: 179 TLLLVWILCYFC 190
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 3.4
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 328 EPEKIKIWREEQKQRLEEKDAEEERKKQEMLLIAKKELEDWYKTH 462
EP + +W E K R + EE ++QE + A Y+ H
Sbjct: 575 EPPRA-LWPTEWKVRPSTVEEREEFRRQERMRYAAPHKAFTYRMH 618
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 127 AAEFLAREQNQLAGLEDELETSAPPPVMTSTTNGLDDFV 243
A++ R+ + GLE+E E + + + G DD++
Sbjct: 229 ASDGWGRQIKLVEGLEEEAEGAITVELQSENIPGFDDYM 267
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +3
Query: 3 TRVIVFLICYFC 38
T +V+++CYFC
Sbjct: 212 TLAVVWIMCYFC 223
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +3
Query: 3 TRVIVFLICYFC 38
T +V+++CYFC
Sbjct: 265 TLAVVWIMCYFC 276
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 4.5
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = +1
Query: 280 LLDEPLQTSVFKQEREEPEK-------IKIWREEQKQRLEEKDAEEERKKQEMLL 423
LL+E + + RE +K + +RE K+R +K E ER K+ ++
Sbjct: 267 LLEERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDK-TERERSKERKII 320
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 127 AAEFLAREQNQLAGLEDELETSAPPPVMTSTTNGLDDFV 243
A++ R+ + GLE+E E + + + G DD++
Sbjct: 319 ASDGWGRQIKLVEGLEEEAEGAITVELQSENIPGFDDYM 357
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2
Query: 191 LVSNSSSRPASWFCSRARNSAAGSTSG 111
L+ +S RPA WF + + A+ G
Sbjct: 19 LIFVTSHRPAWWFWTATSHEASAPAEG 45
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 310 FKQEREEPEKIKIWREEQKQRLEEKDAEEERKKQEMLL 423
+K E+E + +RE K+R +K E ER K+ ++
Sbjct: 50 YKNEKE----YRKYRERSKERSRDK-RERERSKERKII 82
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 310 FKQEREEPEKIKIWREEQKQRLEEKDAEEERKKQEMLL 423
+K E+E + +RE K+R +K E ER K+ ++
Sbjct: 50 YKNEKE----YRKYRERSKERSRDK-RERERSKERKII 82
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 310 FKQEREEPEKIKIWREEQKQRLEEKDAEEER 402
+K ERE + K +E + R+E + ++E +
Sbjct: 272 YKNEREYRKYGKTSKERSRDRMERERSKEPK 302
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/48 (25%), Positives = 17/48 (35%)
Frame = +1
Query: 103 FVQPEVDPAAEFLAREQNQLAGLEDELETSAPPPVMTSTTNGLDDFVE 246
F+ L R Q LED++E + GLD F +
Sbjct: 172 FIHSSDTDGRALLGRFQTTSQNLEDDVEIKVQVESVIEFEPGLDSFTQ 219
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,391
Number of Sequences: 438
Number of extensions: 2485
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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