Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_M04
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         427   e-121
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         427   e-121
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         427   e-121
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          414   e-117
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   1.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   5.9  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   5.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   5.9  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.8  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   7.8  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  427 bits (1052), Expect = e-121
 Identities = 201/201 (100%), Positives = 201/201 (100%)
 Frame = +3

Query: 9   DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 188
           DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK
Sbjct: 26  DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85

Query: 189 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 368
           IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 86  IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145

Query: 369 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 548
           SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 146 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205

Query: 549 EREIVRDIKEKLCYVALDFEQ 611
           EREIVRDIKEKLCYVALDFEQ
Sbjct: 206 EREIVRDIKEKLCYVALDFEQ 226


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  427 bits (1052), Expect = e-121
 Identities = 201/201 (100%), Positives = 201/201 (100%)
 Frame = +3

Query: 9   DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 188
           DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK
Sbjct: 26  DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85

Query: 189 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 368
           IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 86  IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145

Query: 369 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 548
           SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 146 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205

Query: 549 EREIVRDIKEKLCYVALDFEQ 611
           EREIVRDIKEKLCYVALDFEQ
Sbjct: 206 EREIVRDIKEKLCYVALDFEQ 226


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  427 bits (1052), Expect = e-121
 Identities = 201/201 (100%), Positives = 201/201 (100%)
 Frame = +3

Query: 9   DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 188
           DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK
Sbjct: 26  DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85

Query: 189 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 368
           IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 86  IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 145

Query: 369 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 548
           SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 146 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205

Query: 549 EREIVRDIKEKLCYVALDFEQ 611
           EREIVRDIKEKLCYVALDFEQ
Sbjct: 206 EREIVRDIKEKLCYVALDFEQ 226


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  414 bits (1020), Expect = e-117
 Identities = 192/201 (95%), Positives = 198/201 (98%)
 Frame = +3

Query: 9   DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 188
           DAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQSKRGILTLKYPIEHGI+TNWDDMEK
Sbjct: 26  DAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQSKRGILTLKYPIEHGIITNWDDMEK 85

Query: 189 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 368
           IWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKMTQIMFETF  PA+YVAIQAVLSLYA
Sbjct: 86  IWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFAAPAVYVAIQAVLSLYA 145

Query: 369 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 548
           SGRTTG+VLDSGDGVSHTVPIYEGYALPHAILR+DLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 146 SGRTTGVVLDSGDGVSHTVPIYEGYALPHAILRMDLAGRDLTDYLMKILTERGYSFTTTA 205

Query: 549 EREIVRDIKEKLCYVALDFEQ 611
           EREIVRDIKEKLCYVALDFEQ
Sbjct: 206 EREIVRDIKEKLCYVALDFEQ 226


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 373 VVPPVSCWIPAMVYPTQYPSTRVTP 447
           +  PV+   PA+  PT+ P TR +P
Sbjct: 476 IAHPVTVPRPAITAPTRVPQTRTSP 500


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 35  DRGATSSPGRHGRHGSEG 88
           DRG    PGR G  G  G
Sbjct: 309 DRGEPGEPGRSGEKGQAG 326


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 453 AVGRNPRRWVLCGIHHRRNPARYR 382
           A G   RRW   G   RR P  YR
Sbjct: 110 AGGEPSRRWTRSGATGRRQPHPYR 133


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 453 AVGRNPRRWVLCGIHHRRNPARYR 382
           A G   RRW   G   RR P  YR
Sbjct: 110 AGGEPSRRWTRSGATGRRQPHPYR 133


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 457 ACGRA*PS*MGTVWDTPSPESSTIPVVRP 371
           A G+A  + +GT   TP+  ++  PV RP
Sbjct: 13  ATGKAASAVIGTTQSTPATAAAPQPVQRP 41


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 457 ACGRA*PS*MGTVWDTPSPESSTIPVVRP 371
           A G+A  + +GT   TP+  ++  PV RP
Sbjct: 13  ATGKAASAVIGTTQSTPATAAAPQPVQRP 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,744
Number of Sequences: 2352
Number of extensions: 16877
Number of successful extensions: 46
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)