Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_M03
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   395   e-110
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   395   e-110
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   394   e-110
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   394   e-110
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   182   3e-46
BT022180-1|AAY51574.1|  413|Drosophila melanogaster IP01243p pro...    33   0.23 
AE014134-2691|AAF53516.2|  413|Drosophila melanogaster CG17328-P...    33   0.23 
AY058676-1|AAL13905.1|  577|Drosophila melanogaster LD38554p pro...    30   2.1  
AE013599-2062|AAF58134.1|  577|Drosophila melanogaster CG8180-PA...    30   2.1  
AE014298-1832|AAF48218.2|  418|Drosophila melanogaster CG12716-P...    29   6.6  

>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  395 bits (973), Expect = e-110
 Identities = 180/195 (92%), Positives = 187/195 (95%)
 Frame = +3

Query: 24  QMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQ 203
           +MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQ
Sbjct: 13  EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQ 72

Query: 204 LSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF 383
           LSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF
Sbjct: 73  LSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF 132

Query: 384 GKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERE 563
           GKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERE
Sbjct: 133 GKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERE 192

Query: 564 EFEKLRDAGTFANDG 608
            +E+LRD      DG
Sbjct: 193 RYEELRDDNRLEPDG 207


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  395 bits (973), Expect = e-110
 Identities = 180/195 (92%), Positives = 187/195 (95%)
 Frame = +3

Query: 24  QMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQ 203
           +MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQ
Sbjct: 19  EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQ 78

Query: 204 LSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF 383
           LSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF
Sbjct: 79  LSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF 138

Query: 384 GKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERE 563
           GKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERE
Sbjct: 139 GKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERE 198

Query: 564 EFEKLRDAGTFANDG 608
            +E+LRD      DG
Sbjct: 199 RYEELRDDNRLEPDG 213


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  394 bits (971), Expect = e-110
 Identities = 180/194 (92%), Positives = 186/194 (95%)
 Frame = +3

Query: 27  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 206
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 207 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 386
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 387 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYEREE 566
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERE 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 567 FEKLRDAGTFANDG 608
           +E+LRD      DG
Sbjct: 181 YEELRDDNRLEPDG 194


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  394 bits (971), Expect = e-110
 Identities = 180/194 (92%), Positives = 186/194 (95%)
 Frame = +3

Query: 27  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 206
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 207 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 386
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 387 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYEREE 566
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERE 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 567 FEKLRDAGTFANDG 608
           +E+LRD      DG
Sbjct: 181 YEELRDDNRLEPDG 194


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  182 bits (444), Expect = 3e-46
 Identities = 112/197 (56%), Positives = 125/197 (63%), Gaps = 2/197 (1%)
 Frame = +3

Query: 24  QMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQ 203
           +MGRRPARCYRY           C+  P PK R F  G     +  F L           
Sbjct: 6   EMGRRPARCYRY-----------CKNKPYPKSR-FCRGVPDPKIRIFDL----------G 43

Query: 204 LSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRI--NKMLSCAGADRLQTGMRG 377
                +E   +C   +LV     D++  ++        RI  NKMLSCAGADRLQTGMRG
Sbjct: 44  RKKATVEDFPLCV--HLVS----DEYE-QLSSEALEAGRICCNKMLSCAGADRLQTGMRG 96

Query: 378 AFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYE 557
           AFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYE
Sbjct: 97  AFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYE 156

Query: 558 REEFEKLRDAGTFANDG 608
           RE +E+LRD      DG
Sbjct: 157 RERYEELRDDNRLEPDG 173


>BT022180-1|AAY51574.1|  413|Drosophila melanogaster IP01243p
           protein.
          Length = 413

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
 Frame = -1

Query: 434 HNGLSNTHTRYCALGFPER---TTHP-SLEPISSSARQHFIDADDMEGV*SHP 288
           H G+ N H   C   F  R    TH   L P+ SS     +D DD E + + P
Sbjct: 253 HTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDP 305


>AE014134-2691|AAF53516.2|  413|Drosophila melanogaster CG17328-PA
           protein.
          Length = 413

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
 Frame = -1

Query: 434 HNGLSNTHTRYCALGFPER---TTHP-SLEPISSSARQHFIDADDMEGV*SHP 288
           H G+ N H   C   F  R    TH   L P+ SS     +D DD E + + P
Sbjct: 253 HTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDP 305


>AY058676-1|AAL13905.1|  577|Drosophila melanogaster LD38554p
           protein.
          Length = 577

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -1

Query: 389 FPERTTHPSLEPISSSARQHFIDADDME 306
           F +  +HP+ +P+ S+  +HFI++D  E
Sbjct: 61  FGDLLSHPTFKPLCSAQHEHFIESDGKE 88


>AE013599-2062|AAF58134.1|  577|Drosophila melanogaster CG8180-PA
           protein.
          Length = 577

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -1

Query: 389 FPERTTHPSLEPISSSARQHFIDADDME 306
           F +  +HP+ +P+ S+  +HFI++D  E
Sbjct: 61  FGDLLSHPTFKPLCSAQHEHFIESDGKE 88


>AE014298-1832|AAF48218.2|  418|Drosophila melanogaster CG12716-PA
           protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -3

Query: 222 PAPQNSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLGQAHPDKTEI*DTVYSYNIDNIS 43
           P P  S   T  T +AR+  + P S S  P R    +  A+P    +   + +YN+ NI 
Sbjct: 244 PRPFFSTTTTRITTTARMRPTKPTSTSPSPMRFQQLMNVANP-MVSVSQAIDAYNVYNIP 302

Query: 42  LVG 34
            VG
Sbjct: 303 DVG 305


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,432,831
Number of Sequences: 53049
Number of extensions: 710984
Number of successful extensions: 1896
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)