Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_M02
(562 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 299 5e-83
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 25 2.2
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 24 3.9
EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein. 23 6.8
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 23 6.8
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 6.8
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 9.0
EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 23 9.0
EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein. 23 9.0
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 9.0
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 9.0
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 23 9.0
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 299 bits (733), Expect = 5e-83
Identities = 135/169 (79%), Positives = 147/169 (86%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 415
TCQ+AY RIEGD IVCAAYSHELPRYG+KVGLTNYAAAYCTG D+LY
Sbjct: 61 TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120
Query: 416 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMNGAVDG 562
G T+VTG+EY VEPVD GP AFRCYLDVGLARTTTG+RVFGAM GAVDG
Sbjct: 121 GCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDG 169
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 24.6 bits (51), Expect = 2.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 416 GATEVTGDEYNVEPVDNGPG 475
G T+ +GD+ ++ DNG G
Sbjct: 2011 GGTDASGDDLEIDACDNGCG 2030
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 23.8 bits (49), Expect = 3.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 213 TISRYFGVLYLFLSWTTRRL 154
TI RYF + + FLS T +L
Sbjct: 141 TIERYFAICHPFLSHTMSKL 160
>EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.0 bits (47), Expect = 6.8
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 221 ITVQSVGTLECCICFYPGQRGVCEHSSQ 138
+ QSV L C C P C+ S+Q
Sbjct: 19 LLAQSVSALRCYQCASPSSWSDCQASAQ 46
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 23.0 bits (47), Expect = 6.8
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 561 PSTAPFMAPNTRAPVV-VRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 415
P A +A P+V V +P+S + G +S + + +P S+AP
Sbjct: 114 PRDASKIAARLIIPIVPVTVRPSSPKPNSRKGKISNANDKHVAPALSIAP 163
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.0 bits (47), Expect = 6.8
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -1
Query: 367 QQTSAVGSSIVSQTHLDTIAWEFM 296
++ SA+ + VSQ+ ++T WE +
Sbjct: 170 ERKSAIDLTFVSQSLMETTGWEVL 193
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 22.6 bits (46), Expect = 9.0
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 477 APGPLSTGSTLYSSPVTSVAPV-*RLSKPSLCN 382
APGP ST+ T+VAP+ +L SL N
Sbjct: 558 APGPDGIPSTVLKRCQTTVAPILAKLFNASLAN 590
>EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 212 QSVGTLECCICFYPGQRGVCEHSSQ 138
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 212 QSVGTLECCICFYPGQRGVCEHSSQ 138
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 212 QSVGTLECCICFYPGQRGVCEHSSQ 138
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 212 QSVGTLECCICFYPGQRGVCEHSSQ 138
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 212 QSVGTLECCICFYPGQRGVCEHSSQ 138
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 212 QSVGTLECCICFYPGQRGVCEHSSQ 138
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 212 QSVGTLECCICFYPGQRGVCEHSSQ 138
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 212 QSVGTLECCICFYPGQRGVCEHSSQ 138
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 123 VVREKLTTMLANASLSRIKTNTTLQSTD 206
V+RE L + + +KTN +STD
Sbjct: 1983 VMREALVNLTRESCYQIVKTNEVPESTD 2010
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 22.6 bits (46), Expect = 9.0
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 95 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYR 205
KR+ V R GK++++ + V+ D+ + P+ R
Sbjct: 25 KRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQR 61
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 22.6 bits (46), Expect = 9.0
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 463 VNWFNIIFITSDFSGTCVETVQAEPLQQSSCQQQTSAVGSSIVS 332
+N FN+ G C V P Q + ++AVGS+I S
Sbjct: 310 LNLFNMDVTKKCLIGECWVPVPDLPKVQKALSDGSAAVGSTIPS 353
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,543
Number of Sequences: 2352
Number of extensions: 12595
Number of successful extensions: 67
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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