Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_L23
(564 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 27 0.099
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 27 0.099
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 27 0.099
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 27 0.099
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 27 0.099
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 27 0.099
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 27 0.17
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 23 2.1
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 2.8
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 3.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 3.7
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 4.9
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 6.5
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 8.6
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.099
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 6 RKKTATAEERRPQPPK--KEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 167
RKK E+ + K +E +R+R + E++S+K E+ R+ RKT+ R
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68
Score = 24.6 bits (51), Expect = 0.70
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 3 TRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKRE 122
+RK+ + + ER + K E+ R+ +KT+ R +RE
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERE 74
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.099
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 6 RKKTATAEERRPQPPK--KEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 167
RKK E+ + K +E +R+R + E++S+K E+ R+ RKT+ R
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68
Score = 24.6 bits (51), Expect = 0.70
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 3 TRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKRE 122
+RK+ + + ER + K E+ R+ +KT+ R +RE
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERE 74
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.099
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 6 RKKTATAEERRPQPPK--KEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 167
RKK E+ + K +E +R+R + E++S+K E+ R+ RKT+ R
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68
Score = 24.6 bits (51), Expect = 0.70
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 3 TRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKRE 122
+RK+ + + ER + K E+ R+ +KT+ R +RE
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERE 74
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.099
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 6 RKKTATAEERRPQPPK--KEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 167
RKK E+ + K +E +R+R + E++S+K E+ R+ RKT+ R
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68
Score = 24.6 bits (51), Expect = 0.70
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 3 TRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKRE 122
+RK+ + + ER + K E+ R+ +KT+ R +RE
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERE 74
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.099
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 6 RKKTATAEERRPQPPK--KEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 167
RKK E+ + K +E +R+R + E++S+K E+ R+ RKT+ R
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68
Score = 24.6 bits (51), Expect = 0.70
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 3 TRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKRE 122
+RK+ + + ER + K E+ R+ +KT+ R +RE
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERE 74
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.099
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 6 RKKTATAEERRPQPPK--KEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADER 167
RKK E+ + K +E +R+R + E++S+K E+ R+ RKT+ R
Sbjct: 13 RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKYRKTSKERSR 68
Score = 24.6 bits (51), Expect = 0.70
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 3 TRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKRE 122
+RK+ + + ER + K E+ R+ +KT+ R +RE
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERE 74
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.17
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 TRKKTATAEERRPQPPKKEDCNR-RRKKTATIEERRSWKREDCNRRRRKTATADE 164
+R+++ + + R K + +K +EER S KR C+R R + + +E
Sbjct: 232 SRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSCSREREQKSYKNE 286
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 23.0 bits (47), Expect = 2.1
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +2
Query: 311 RSWKKKTIKSAEGAGRKKTNKLAEEG------VGRKKTIKLAEEAGRKK 439
+S K+ I ++ KTN + EG VG K + + ++ G KK
Sbjct: 267 KSGKRNIIDNSAQKTESKTNNIVVEGVSFGQSVGLKDDLDIDDDVGEKK 315
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 356 RKKTNKLAEEGVGRKKTIKLAEEAGRKKTAI 448
R++ ++ E GV K + L+ E+G KKT +
Sbjct: 1017 RQEKEEMVELGVLDKIFLALSRESGFKKTYV 1047
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 31 KEDRNRRRKKTATAEE 78
+++RN RRKKT A E
Sbjct: 124 QDNRNDRRKKTFAARE 139
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 560 TRNCSSTIIWPTHH 519
T NC T IW HH
Sbjct: 53 TTNCWVTQIWTDHH 66
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 10 RRLQPPKKEDRNRRRKKT 63
R+ P +KE RRR++T
Sbjct: 397 RQTPPSRKESGRRRRRRT 414
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 33 RRPQPPKKEDCNRRRKKT 86
R+ P +KE RRR++T
Sbjct: 397 RQTPPSRKESGRRRRRRT 414
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 384 SSASLLVFFLPAPSADLIVFFFQLL 310
S S+LVF+LP+ S + + +L
Sbjct: 251 SFLSVLVFYLPSDSGEKVSLSISIL 275
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 343 RRSWKKED*QACGRRSWKKE 402
RRSW + Q C S KE
Sbjct: 352 RRSWVTRESQICNNSSSDKE 371
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,542
Number of Sequences: 438
Number of extensions: 2776
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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