Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_L22
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 59 2e-09
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 31 0.11
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 31 0.11
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 31 0.11
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 31 0.11
AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical ... 29 2.8
Z70203-3|CAA94106.2| 219|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 27 8.6
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 8.6
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 8.6
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 27 8.6
AC091125-5|AAK27884.2| 297|Caenorhabditis elegans Hypothetical ... 27 8.6
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/90 (31%), Positives = 46/90 (51%)
Frame = +1
Query: 1 ARGRARLGLYIFARANLFRNCFELQPTFNQLIERPLQLELVPGERYPAQRRNDAAVPEAL 180
A RARLGLY+ R+ +F +C EL P + P +L ++P E +P R+ + +
Sbjct: 1295 ALSRARLGLYVLGRSKVFMDCLELTPAMRIFAKYPRKLVILPFEAHPTIRKWNERSKDGE 1354
Query: 181 ILSITDMPHMARYVYDLYLEKVRDCTKQYE 270
+ I D HM +V++ Y+ + YE
Sbjct: 1355 PMEIQDTLHMTHFVHEFYMSNLPAMRDAYE 1384
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 31.5 bits (68), Expect(2) = 0.11
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 304 AKASRSQQPDRLVPTHPGATDGQDSDD-EESAIPSTSSFQPTHIVNEIDEPPELS 465
A A S+ D P PG+T+ QD+ D +S S +S Q E E PE++
Sbjct: 130 ASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
Score = 20.6 bits (41), Expect(2) = 0.11
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 124 PGERYPAQRRNDAAVPEALILSITDMP 204
P PAQ ++A+ P+ + D+P
Sbjct: 96 PEASAPAQEASEASAPDQEAPEVQDVP 122
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 31.5 bits (68), Expect(2) = 0.11
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 304 AKASRSQQPDRLVPTHPGATDGQDSDD-EESAIPSTSSFQPTHIVNEIDEPPELS 465
A A S+ D P PG+T+ QD+ D +S S +S Q E E PE++
Sbjct: 130 ASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
Score = 20.6 bits (41), Expect(2) = 0.11
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 124 PGERYPAQRRNDAAVPEALILSITDMP 204
P PAQ ++A+ P+ + D+P
Sbjct: 96 PEASAPAQEASEASAPDQEAPEVQDVP 122
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 31.5 bits (68), Expect(2) = 0.11
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 304 AKASRSQQPDRLVPTHPGATDGQDSDD-EESAIPSTSSFQPTHIVNEIDEPPELS 465
A A S+ D P PG+T+ QD+ D +S S +S Q E E PE++
Sbjct: 93 ASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 147
Score = 20.6 bits (41), Expect(2) = 0.11
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 124 PGERYPAQRRNDAAVPEALILSITDMP 204
P PAQ ++A+ P+ + D+P
Sbjct: 59 PEASAPAQEASEASAPDQEAPEVQDVP 85
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 31.5 bits (68), Expect(2) = 0.11
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 304 AKASRSQQPDRLVPTHPGATDGQDSDD-EESAIPSTSSFQPTHIVNEIDEPPELS 465
A A S+ D P PG+T+ QD+ D +S S +S Q E E PE++
Sbjct: 130 ASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
Score = 20.6 bits (41), Expect(2) = 0.11
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 124 PGERYPAQRRNDAAVPEALILSITDMP 204
P PAQ ++A+ P+ + D+P
Sbjct: 96 PEASAPAQEASEASAPDQEAPEVQDVP 122
>AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical
protein Y23H5A.4 protein.
Length = 380
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 314 DAFADPGADHELWELSYCLVQSRTFSK 234
D F+DPG + + Y L+ SR++SK
Sbjct: 333 DDFSDPGVSIDKLAIDYALIPSRSYSK 359
>Z70203-3|CAA94106.2| 219|Caenorhabditis elegans Hypothetical
protein C05G5.3 protein.
Length = 219
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 307 KASRSQQPDRLVPTHPGA-TDGQDSDDEESAIPSTSSFQPTHIVNEIDEPPELSK 468
+AS S++ + T + TD QD D+EE +P ++ + T+ N + P S+
Sbjct: 78 RASNSEKDNSEEKTESESETDEQDEDEEEEQMPQFNNRKITNTQNFCPDEPSTSQ 132
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
protein C10C6.6 protein.
Length = 1178
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 215 RAICGISVILNINASGTAASFRLCAGYRSPGTS 117
+ I GI + + S + AGY+SPGTS
Sbjct: 566 KGISGIKIFHRYHFSSAMKRMTVVAGYQSPGTS 598
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 373 DSDDEESAIPSTSSFQPTHIVNEIDEPPE 459
D +D ES +PS +PT + E+ E E
Sbjct: 3393 DKNDSESPVPSEKEQEPTTVSREVYETAE 3421
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 373 DSDDEESAIPSTSSFQPTHIVNEIDEPPE 459
D +D ES +PS +PT + E+ E E
Sbjct: 3393 DKNDSESPVPSEKEQEPTTVSREVYETAE 3421
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 355 GATDGQDSDDEESAIPSTSSFQPT-HIVNEIDEPPELSK 468
G D DSDD+E A T +V + EPPE +K
Sbjct: 736 GKIDKIDSDDDEEADDEELEADVTDEVVEDSQEPPEATK 774
>AC091125-5|AAK27884.2| 297|Caenorhabditis elegans Hypothetical
protein Y67D2.7 protein.
Length = 297
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 364 DGQDSDDEESAIPSTSSFQPTHIVNEIDEPPELSK 468
DG D D++ S P S P + E PP S+
Sbjct: 97 DGDDDDEDSSEPPKISGATPISEIREPAPPPRQSR 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,605,717
Number of Sequences: 27780
Number of extensions: 237003
Number of successful extensions: 813
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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