Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L22
         (536 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          27   0.092
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      27   0.092
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   4.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   6.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   8.0  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 27.5 bits (58), Expect = 0.092
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 283 NSGNFRTV-WCNPEPFPSRGRRRSAPYAAYRLYSI 182
           NSG + T+ + N   FP R R  S PY  Y+  ++
Sbjct: 294 NSGFYSTIMYSNGVTFPQRNRFSSLPYYKYKYLNV 328


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 27.5 bits (58), Expect = 0.092
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 283 NSGNFRTV-WCNPEPFPSRGRRRSAPYAAYRLYSI 182
           NSG + T+ + N   FP R R  S PY  Y+  ++
Sbjct: 294 NSGFYSTIMYSNGVTFPQRNRFSSLPYYKYKYLNV 328


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 329 GCCERDAFADPGADHELWELSY 264
           GC     FA PG D+ L E+ +
Sbjct: 10  GCTRSAHFARPGGDYSLDEIEW 31


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 189 YNRYAAYGALRLRPLLGKGSGLHQTVRKFPEFVVRPRVCESIT 317
           Y+ Y    ALR R +L KG+   + + K    VVR    E+++
Sbjct: 462 YHLYTNLTALRKRDVLKKGNFTIEILNKTVLAVVRQSEEEAVS 504


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 288 VRPRVCESITFAAARPASTN 347
           +RP V +  T AA  PA+TN
Sbjct: 341 IRPMVKQIDTVAAEWPATTN 360


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 146 CAGYRSPGTSSNCSGRS 96
           C G R PG ++  S RS
Sbjct: 88  CCGMRWPGDATGLSNRS 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,442
Number of Sequences: 438
Number of extensions: 3127
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)