Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L19
         (509 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   2.6  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   7.9  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   7.9  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   7.9  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   7.9  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 289  TLENRRKNSPVSDNKKGRSPSVHDRRKRSPSPG 387
            T+ N   +S  S  K   S +   +RK++ SPG
Sbjct: 962  TISNNTNSSSSSGKKSSHSGTNSSKRKKTVSPG 994


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 115  YRRENTGSPQYRERKISPSLEH 180
            +  EN G     +RK++P L+H
Sbjct: 3044 FNTENQGKQDQEDRKVNPYLKH 3065


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 323 ETGLFFLLFSKVGLLFVLYSGVGLCLR 243
           E   F   F+ + ++ +LY+ +GL LR
Sbjct: 208 ELSTFLFFFAPMTMITILYALIGLKLR 234


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 271 KTKRSPTLENRRKNSPVSDNKKGRSPSVHDRRKR 372
           KT+ +P     R     SDN K R  + H+ R +
Sbjct: 169 KTRNAPPERGHRCGRTESDNAKTRRRARHNTRTK 202


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 271 KTKRSPTLENRRKNSPVSDNKKGRSPSVHDRRKR 372
           KT+ +P     R     SDN K R  + H+ R +
Sbjct: 169 KTRNAPPERGHRCGRTESDNAKTRRRTRHNTRTK 202


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/48 (18%), Positives = 24/48 (50%)
 Frame = +1

Query: 244 RKQRPTPEYKTKRSPTLENRRKNSPVSDNKKGRSPSVHDRRKRSPSPG 387
           ++Q+  P+ + ++ P  +  ++  P     + R P+  +  + SP+ G
Sbjct: 459 QRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEG 506


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.304    0.124    0.344 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,238
Number of Sequences: 2352
Number of extensions: 8709
Number of successful extensions: 54
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)