Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L19
         (509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   1.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.2  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   7.4  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 160 FYVLYTEVIQYFL 122
           FY+LY +++ YFL
Sbjct: 420 FYMLYQKILSYFL 432


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 256 PTPEYKTKRSPTLENRRKNSPVSDNKKGRSPSV 354
           P+P   TKR  T E   +  P+   +  + PS+
Sbjct: 619 PSPPVTTKRDGTQETEERLPPLPPKRIRKMPSM 651


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 160 FYVLYTEVIQYFL 122
           FY+LY  ++ YFL
Sbjct: 420 FYMLYQNILSYFL 432


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 259  TPEYKTKRSPTLENRRKNSPVSDNKKGRSPSV 354
            T EYK K    +  R+++   SD+K   + +V
Sbjct: 1075 TLEYKVKERHLMRPRKRDQKQSDDKTKETSTV 1106


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 310 NSPVSDNKKGRSPSVHDRRKRS 375
           N+   DN  G   + +DRRK++
Sbjct: 113 NNDYEDNDYGNQDNRNDRRKKT 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.304    0.124    0.344 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,953
Number of Sequences: 438
Number of extensions: 2623
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.0 bits)