Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L16
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   3.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.9  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 233 EGLIAVVVGTVSNDVRLYTV 292
           + ++A+V+GT+ N    YTV
Sbjct: 62  KSIVAMVMGTIVNAFSCYTV 81


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 575 LIL*RFRHWSDGSAVRARVPW 513
           LI+ RF + +DGS +  R P+
Sbjct: 276 LIVERFANITDGSIIGVRAPY 296


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 575 LIL*RFRHWSDGSAVRARVPW 513
           LI+ RF + +DGS +  R P+
Sbjct: 283 LIVERFANITDGSIIGVRAPY 303


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 473 APARSDELPHEHYGDPEP 420
           A  +SDE+P E    PEP
Sbjct: 384 AALKSDEIPPEPVPTPEP 401


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 5   EVGIDINHKHDRKV 46
           ++G++INHK D +V
Sbjct: 406 KLGLEINHKEDFRV 419


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 452 VRHFGPAPGAPRSHTKPYVRTKGHEHARPSRRSNV*IF 565
           +RH G    +P +H + Y     +  A P+R S   +F
Sbjct: 70  IRHHGQWNYSPDNHFEQYPNPTYYNLADPARDSRKGLF 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,547
Number of Sequences: 336
Number of extensions: 2895
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)