Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L13
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   5.5  
AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding pr...    23   7.3  
AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding pr...    23   7.3  
AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding pr...    23   7.3  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 168 FEPYADNGGSIVAIAGDDYAVIGAD 242
           F+P+A +G  +VA A     V GAD
Sbjct: 222 FDPFAGSGSLLVAAAKFGAYVAGAD 246


>AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding
           protein AgamOBP30 protein.
          Length = 289

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = +1

Query: 115 VLMKISPNMRFPAPSR-FALNRTQTTVAALLQSLAMTMQSLVPILALARASLSTRGIRRS 291
           VL++ +  +++P P R F+  +T    A       +    L   L   +   +   I   
Sbjct: 178 VLLQCADMLQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTGLYSEQYGPNLDRIYVQ 237

Query: 292 CLDYQNAXVLRXATCACW 345
           C +Y N  V R  T AC+
Sbjct: 238 CNNYANETVFRETTDACY 255


>AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding
           protein OBPjj83c protein.
          Length = 273

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = +1

Query: 115 VLMKISPNMRFPAPSR-FALNRTQTTVAALLQSLAMTMQSLVPILALARASLSTRGIRRS 291
           VL++ +  +++P P R F+  +T    A       +    L   L   +   +   I   
Sbjct: 162 VLLQCADMLQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTGLYSEQYGPNLDRIYVQ 221

Query: 292 CLDYQNAXVLRXATCACW 345
           C +Y N  V R  T AC+
Sbjct: 222 CNNYANETVFRETTDACY 239


>AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 289

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = +1

Query: 115 VLMKISPNMRFPAPSR-FALNRTQTTVAALLQSLAMTMQSLVPILALARASLSTRGIRRS 291
           VL++ +  +++P P R F+  +T    A       +    L   L   +   +   I   
Sbjct: 178 VLLQCADMLQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTGLYSEQYGPNLDRIYVQ 237

Query: 292 CLDYQNAXVLRXATCACW 345
           C +Y N  V R  T AC+
Sbjct: 238 CNNYANETVFRETTDACY 255


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,806
Number of Sequences: 2352
Number of extensions: 11518
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)