Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_L13
(589 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 2.2
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 5.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 5.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 5.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 5.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 5.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.1
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 6.8
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 6.8
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 6.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 6.8
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 123 ENFPEYAVPGAKQ 161
EN+P Y + GAKQ
Sbjct: 80 ENYPHYQMSGAKQ 92
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 278 PRVDREARAKASIGTNDCIVI 216
PR+ REA KA G N I I
Sbjct: 58 PRLRREAEPKAEPGNNRPIYI 78
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 483 VRKETFVVQHCGEHLRDRRSCHR 415
+R T QH H RSC R
Sbjct: 217 LRSRTHGFQHTSSHYSRERSCSR 239
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 483 VRKETFVVQHCGEHLRDRRSCHR 415
+R T QH H RSC R
Sbjct: 217 LRSRTHGFQHTSSHYSRERSCSR 239
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 483 VRKETFVVQHCGEHLRDRRSCHR 415
+R T QH H RSC R
Sbjct: 217 LRSRTHGFQHTSSHYSRERSCSR 239
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 483 VRKETFVVQHCGEHLRDRRSCHR 415
+R T QH H RSC R
Sbjct: 217 LRSRTHGFQHTSSHYSRERSCSR 239
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 483 VRKETFVVQHCGEHLRDRRSCHR 415
+R T QH H RSC R
Sbjct: 206 LRSRTHGFQHTSSHYSRERSCSR 228
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 483 VRKETFVVQHCGEHLRDRRSCHR 415
+R T QH H RSC R
Sbjct: 217 LRSRTHGFQHTSSHYSRERSCSR 239
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 6.8
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +1
Query: 385 MQMYEHDHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNV 498
++ + D+ S T L L +KR F YY+ +
Sbjct: 211 LEKFFTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQI 248
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 6.8
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +1
Query: 385 MQMYEHDHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNV 498
++ + D+ S T L L +KR F YY+ +
Sbjct: 211 LEKFFTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQI 248
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 192 GSIVAIAGDDYAVIGA 239
G I+A GD + VIGA
Sbjct: 102 GIIIAYTGDVHGVIGA 117
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.8
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = -1
Query: 523 CHLHLSQLRH*IRSKERNVCSTTLWRASARPQELSSTCCDHVH 395
CH LRH R+ RN + R +R + D +H
Sbjct: 230 CHSRYEDLRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLH 272
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,427
Number of Sequences: 438
Number of extensions: 3196
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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