Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_L11
(362 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0217 - 1644696-1645034,1645143-1645214 157 3e-39
11_01_0348 - 2607315-2607424,2608634-2609030 155 1e-38
06_01_0428 + 3055163-3055573 155 1e-38
06_01_0427 - 3054204-3054614 155 1e-38
06_01_0423 - 3039527-3039937 155 1e-38
05_04_0449 - 21355439-21355849 155 1e-38
04_03_0909 + 20748653-20749063 155 1e-38
01_06_1456 + 37507156-37507566 155 1e-38
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 142 1e-34
12_02_0048 - 12852335-12852745 123 5e-29
12_02_0047 - 12836779-12837189 117 3e-27
06_01_0425 - 3045557-3046004,3046852-3046856 116 6e-27
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 115 1e-26
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 101 2e-22
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 93 5e-20
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 70 6e-13
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 30 0.49
05_05_0298 - 23926266-23926442,23926573-23926632,23926822-239270... 29 1.1
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 28 2.0
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 27 3.4
01_01_1006 - 7972645-7973811 27 3.4
01_03_0021 + 11720744-11720898,11720991-11721246 27 6.0
01_01_1163 + 9258427-9258451,9258581-9258681,9258890-9258967,925... 27 6.0
08_01_0704 + 6219530-6219609,6221595-6222243,6222339-6222437,622... 26 7.9
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 157 bits (380), Expect = 3e-39
Identities = 76/80 (95%), Positives = 78/80 (97%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 301 LLIRKLAFQRLVREIAPDFK 360
LLIRKL FQRLVREIA DFK
Sbjct: 61 LLIRKLPFQRLVREIAQDFK 80
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 155 bits (376), Expect = 1e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 301 LLIRKLAFQRLVREIAPDFK 360
LLIRKL FQRLVREIA DFK
Sbjct: 61 LLIRKLPFQRLVREIAQDFK 80
>06_01_0428 + 3055163-3055573
Length = 136
Score = 155 bits (376), Expect = 1e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 301 LLIRKLAFQRLVREIAPDFK 360
LLIRKL FQRLVREIA DFK
Sbjct: 61 LLIRKLPFQRLVREIAQDFK 80
>06_01_0427 - 3054204-3054614
Length = 136
Score = 155 bits (376), Expect = 1e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 301 LLIRKLAFQRLVREIAPDFK 360
LLIRKL FQRLVREIA DFK
Sbjct: 61 LLIRKLPFQRLVREIAQDFK 80
>06_01_0423 - 3039527-3039937
Length = 136
Score = 155 bits (376), Expect = 1e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 301 LLIRKLAFQRLVREIAPDFK 360
LLIRKL FQRLVREIA DFK
Sbjct: 61 LLIRKLPFQRLVREIAQDFK 80
>05_04_0449 - 21355439-21355849
Length = 136
Score = 155 bits (376), Expect = 1e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 301 LLIRKLAFQRLVREIAPDFK 360
LLIRKL FQRLVREIA DFK
Sbjct: 61 LLIRKLPFQRLVREIAQDFK 80
>04_03_0909 + 20748653-20749063
Length = 136
Score = 155 bits (376), Expect = 1e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 301 LLIRKLAFQRLVREIAPDFK 360
LLIRKL FQRLVREIA DFK
Sbjct: 61 LLIRKLPFQRLVREIAQDFK 80
>01_06_1456 + 37507156-37507566
Length = 136
Score = 155 bits (376), Expect = 1e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 301 LLIRKLAFQRLVREIAPDFK 360
LLIRKL FQRLVREIA DFK
Sbjct: 61 LLIRKLPFQRLVREIAQDFK 80
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 142 bits (343), Expect = 1e-34
Identities = 76/94 (80%), Positives = 78/94 (82%), Gaps = 14/94 (14%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATK--------------AARKSAPSTGGVKKPHRYRPGT 258
MARTKQTARKSTGGKAPRKQLATK AARKSAP+TGGVKKPHRYRPGT
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKSDFDRWSYITISVQAARKSAPTTGGVKKPHRYRPGT 60
Query: 259 VALREIRRYQKSTELLIRKLAFQRLVREIAPDFK 360
VALREIR+YQKSTELLIRKL FQRLVREIA DFK
Sbjct: 61 VALREIRKYQKSTELLIRKLPFQRLVREIAQDFK 94
>12_02_0048 - 12852335-12852745
Length = 136
Score = 123 bits (296), Expect = 5e-29
Identities = 59/80 (73%), Positives = 66/80 (82%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTA+KST PRK L K ARKSAP+ G+KKPHR++PGTVALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTASNVPRKLLVMKVARKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTE 60
Query: 301 LLIRKLAFQRLVREIAPDFK 360
LLIRKL FQRLV+EIA D +
Sbjct: 61 LLIRKLPFQRLVQEIAQDVR 80
>12_02_0047 - 12836779-12837189
Length = 136
Score = 117 bits (281), Expect = 3e-27
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTA+KST G PRK L K ARKSAP G+KKPHR+ P VALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTAGNVPRKLLVMKVARKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTE 60
Query: 301 LLIRKLAFQRLVREIAPDFK 360
LLIRKL FQRLV+EI D +
Sbjct: 61 LLIRKLPFQRLVQEITQDIR 80
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 116 bits (279), Expect = 6e-27
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +1
Query: 172 RKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLAFQRLVREIAP 351
RKQLATKA KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKL FQRLVREIA
Sbjct: 32 RKQLATKATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 91
Query: 352 DFK 360
DFK
Sbjct: 92 DFK 94
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 115 bits (276), Expect = 1e-26
Identities = 64/90 (71%), Positives = 68/90 (75%), Gaps = 10/90 (11%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGV----------KKPHRYRPGTVALR 270
MARTKQTARKSTGGKAPRK L AA APS+ GV KKP R+RPGTVALR
Sbjct: 66 MARTKQTARKSTGGKAPRKPLRAIAAVMPAPSSRGVARKSVPFIGVKKPRRHRPGTVALR 125
Query: 271 EIRRYQKSTELLIRKLAFQRLVREIAPDFK 360
EIR+YQK+TELLIRKL FQRLVREIA FK
Sbjct: 126 EIRKYQKNTELLIRKLPFQRLVREIAQHFK 155
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 101 bits (241), Expect = 2e-22
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +1
Query: 193 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLAFQRLVREIAPDFK 360
AARKSAP GGVKKPHRYRPGTVALREIR+YQK+TELLIRKL FQRLVREIA FK
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFK 59
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 93.5 bits (222), Expect = 5e-20
Identities = 48/72 (66%), Positives = 53/72 (73%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRY P R+Q
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYPPWKRCSSTDLRFQSHAV 60
Query: 301 LLIRKLAFQRLV 336
L +++ A LV
Sbjct: 61 LALQEAAEAYLV 72
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 69.7 bits (163), Expect = 6e-13
Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Frame = +1
Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKS-APSTGGV-------KKPHRYRPGTVALREI 276
MARTK A + + + +K ++ R S A GG +KPHR+RPGTVALREI
Sbjct: 1 MARTKHPAVRKSKAEPKKKLQFERSPRPSKAQRAGGTPRQQTKQRKPHRFRPGTVALREI 60
Query: 277 RRYQKSTELLIRKLAFQRLVREIAPDF 357
R++QK+TELLI F RLVREI DF
Sbjct: 61 RKFQKTTELLIPFAPFSRLVREIT-DF 86
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 30.3 bits (65), Expect = 0.49
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 124 ARTKQTARKS-TGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP 252
AR AR+ GG+ P + LA+ A SA + GG ++P + P
Sbjct: 14 ARAAAAARRHHAGGRDPLRALASLAGDASASAGGGARRPAWFAP 57
>05_05_0298 -
23926266-23926442,23926573-23926632,23926822-23927029,
23927471-23927703,23928806-23928860,23928943-23929649
Length = 479
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 145 RKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRK-LA 321
R+ + Q+A K R+ P+ G+K+ + PG+ L ++ S LL + L
Sbjct: 28 RRGVSKSEEKTQVAIKTLRRLGPAMAGMKQGTKPVPGS-GLPMWKQVSISDALLTNEILV 86
Query: 322 FQRLVREIAP 351
+R+V +AP
Sbjct: 87 MRRIVESVAP 96
>05_04_0149 -
18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/77 (24%), Positives = 32/77 (41%)
Frame = -3
Query: 339 SNESLESQLADQQLRRFLIATNFSKRYSTRAITMGFLNSTSTGCRFSRRFSSQLFARSFT 160
S+ +L L D+Q+R + NF+ G S +GCR F+ + +
Sbjct: 694 SSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLP--FNLRRKRHNCY 751
Query: 159 SCRFTGCLLCTCHYSLQ 109
+C C C+ SL+
Sbjct: 752 NCALVFCHACSSKKSLK 768
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 139 TARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALR 270
T+ ++ G +PR++LA+ ST K HR + ALR
Sbjct: 737 TSSMASRGTSPRRRLASDGVNALLKSTDFTDKDHRPSTSSAALR 780
>01_01_1006 - 7972645-7973811
Length = 388
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -1
Query: 254 PGR*RWGFLTPPVLGADFRAALVANCLRGAL--PPVDLRAVCFVRA 123
PG + FL V G D RA V C A+ PP+ + FVRA
Sbjct: 333 PGEVAYFFLHSRVFGVDLRACSVLECEFFAMLNPPMRYHSSRFVRA 378
>01_03_0021 + 11720744-11720898,11720991-11721246
Length = 136
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +3
Query: 231 ETPSLSPWYCSASRNSSLSKIYGVVDP--QAGF--PATRSRNC 347
E P L YC AS S + + + DP AGF PA S C
Sbjct: 75 ENPKLRSAYCCASPLSGMELLMNIADPYITAGFLAPAIASSWC 117
>01_01_1163 +
9258427-9258451,9258581-9258681,9258890-9258967,
9259625-9259765,9260263-9260329,9261039-9261193,
9261285-9261386,9262022-9262141,9262688-9262855
Length = 318
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 181 LATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKS 294
+A+ AR APS+GG +P R G ++ R R Q +
Sbjct: 228 IASFFARIFAPSSGGSSRPSRSLVGNMSSRTSRAVQNN 265
>08_01_0704 +
6219530-6219609,6221595-6222243,6222339-6222437,
6222521-6222616,6222750-6222848,6222929-6223027,
6223811-6223882,6224508-6224597,6225173-6227329
Length = 1146
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 166 APRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLI 309
APR++ + RK PS GG K H+ P + +R + L I
Sbjct: 493 APREKKSFPRKRKQ-PSAGGKPKKHKIVPAKMVAMPVRASPRLASLKI 539
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,221,554
Number of Sequences: 37544
Number of extensions: 169923
Number of successful extensions: 520
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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