Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L11
         (362 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.     159   3e-41
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.       152   4e-39
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   2.7  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   4.7  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    22   6.2  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    22   6.2  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    22   8.1  

>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score =  159 bits (386), Expect = 3e-41
 Identities = 78/80 (97%), Positives = 78/80 (97%)
 Frame = +1

Query: 121 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 300
           MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 301 LLIRKLAFQRLVREIAPDFK 360
           LLIRKL FQRLVREIA DFK
Sbjct: 61  LLIRKLPFQRLVREIAQDFK 80


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score =  152 bits (368), Expect = 4e-39
 Identities = 74/78 (94%), Positives = 75/78 (96%)
 Frame = +1

Query: 127 RTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELL 306
           RTKQTARKSTGGKAPRKQLA KAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELL
Sbjct: 1   RTKQTARKSTGGKAPRKQLARKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELL 60

Query: 307 IRKLAFQRLVREIAPDFK 360
           IRKL FQRLVREIA DFK
Sbjct: 61  IRKLPFQRLVREIAQDFK 78


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 348  SNFSNESLESQLADQQLRRFLIATNFSKRYS 256
            SNF + SL +  AD +  +   A N   R+S
Sbjct: 1031 SNFGSSSLSAPTADNETNKIAEAFNRISRFS 1061


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 235 PHRYRPGTVALREIRRYQKSTELLIRKLAFQRLVREIAP 351
           PH + PG   L +    Q+     +  LAF  +   I P
Sbjct: 163 PHHHHPGLTGLMQAPSQQQQHLQPVHPLAFHPIGGPIVP 201


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 239 WGFLTPPVLGA 207
           WGF+TP +L A
Sbjct: 534 WGFITPTLLAA 544


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 239 WGFLTPPVLGA 207
           WGF+TP +L A
Sbjct: 534 WGFITPTLLAA 544


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 110 SELLKSINYIKLY*NWIY 57
           S++  +  YIK+Y +W+Y
Sbjct: 249 SDMRTNETYIKVYIHWLY 266


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,168
Number of Sequences: 2352
Number of extensions: 5814
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)