Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L09
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    39   3e-05
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   1.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   3.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   5.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   8.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 38.7 bits (86), Expect = 3e-05
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +3

Query: 300 LGNKTYERYNAVAIYLDKRLKELGATRVFELGLGDDDANIEHDFITWKDKFWPAVCE 470
           LG+  Y  + A   Y+D  L ELG  R+ +L  GD+    E  F  W    +   CE
Sbjct: 611 LGSSAYPNFCAFGRYVDNLLGELGGERLLKLAQGDEMCGQEQAFRKWAADTFAVACE 667



 Score = 29.5 bits (63), Expect = 0.019
 Identities = 17/71 (23%), Positives = 35/71 (49%)
 Frame = +2

Query: 26  VFYGSQTGTAEEFAGRLAKEGIRYRMKRMVADPEECDMEELTKLQEISNSLAVFCMATYG 205
           V + ++TGT++ +A +L+ E + +     V    + D+  +        +L +   +T+G
Sbjct: 472 VLFATETGTSQMYAEKLS-ELLGHAFHSQVLSMSDYDISNIEH-----EALLLVITSTFG 525

Query: 206 EGDPTDNSMEF 238
            GDP +N   F
Sbjct: 526 NGDPPENGEAF 536


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 285 MLFVGLGNKTYERYNAVAIYLDKRL 359
           ++ + +G +TYE + +VA+Y   RL
Sbjct: 96  LIDIFMGMRTYEDFLSVAVYCRDRL 120


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 166 YFLQFREFLHITFFRISHHSFH 101
           Y L   +F   + FRI HH F+
Sbjct: 333 YGLLIYDFFKDSSFRIQHHFFY 354


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 333 VAIYLDKRLKELGATRVFELGLGD 404
           VAIY D+ L+ +G   +  L + D
Sbjct: 48  VAIYTDRGLRRIGNLFLASLAIAD 71


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 247 PFIKLHGIVSWVSFAIGCHTKN 182
           P + LHG + W  F     TKN
Sbjct: 299 PPLSLHGQLLWREFFYCAATKN 320


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 269 DPDHHSLTI 243
           DPDHHS  I
Sbjct: 315 DPDHHSTDI 323


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,582
Number of Sequences: 438
Number of extensions: 3243
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)