Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L07
         (392 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-l...    23   3.0  
AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription fact...    22   7.0  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    22   9.2  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    22   9.2  

>AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-like
           3 protein protein.
          Length = 269

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 320 WQVYRLQWKLNLIDRMQAISNAVP 391
           ++  + QW    +DRM +  NA+P
Sbjct: 163 YETLKQQWSAEGLDRMVSFPNALP 186


>AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription factor
           zen protein.
          Length = 52

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 387 TAFDIACILSIRFSFHCRRYTC 322
           TAF  + ++ +   FH  RY C
Sbjct: 5   TAFTSSQLVELEKEFHSNRYLC 26


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 260 LEIYKWILLLIPVGS 304
           L IYKWI++L+ + +
Sbjct: 14  LRIYKWIIVLMLIAN 28


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 6/24 (25%), Positives = 16/24 (66%)
 Frame = -2

Query: 115 KHNHIYYNNRKSLMAVILDRYISL 44
           ++  +Y+  RKS  A +++ Y+++
Sbjct: 105 RYTTVYFLKRKSEAAEVIEEYVTM 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,291
Number of Sequences: 2352
Number of extensions: 6944
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)