Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L07
         (392 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35093-1|CAA84476.1|  300|Homo sapiens SURF-1 protein.                 58   1e-08
BC071658-1|AAH71658.1|  300|Homo sapiens surfeit 1 protein.            58   1e-08
BC028314-1|AAH28314.1|  300|Homo sapiens surfeit 1 protein.            58   1e-08
AL158826-12|CAI12837.1|  300|Homo sapiens surfeit 1 protein.           58   1e-08
AL158826-11|CAI12836.1|  270|Homo sapiens surfeit 1 protein.           58   1e-08

>Z35093-1|CAA84476.1|  300|Homo sapiens SURF-1 protein.
          Length = 300

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = +2

Query: 245 TKKEPLEIYKWILLLIPVGSFGLGSWQVYRLQWKLNLIDRMQAISNAVP 391
           TK E     +W+LLLIPV +FGLG+WQV R +WKLNLI  +++   A P
Sbjct: 54  TKAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEP 102


>BC071658-1|AAH71658.1|  300|Homo sapiens surfeit 1 protein.
          Length = 300

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = +2

Query: 245 TKKEPLEIYKWILLLIPVGSFGLGSWQVYRLQWKLNLIDRMQAISNAVP 391
           TK E     +W+LLLIPV +FGLG+WQV R +WKLNLI  +++   A P
Sbjct: 54  TKAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEP 102


>BC028314-1|AAH28314.1|  300|Homo sapiens surfeit 1 protein.
          Length = 300

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = +2

Query: 245 TKKEPLEIYKWILLLIPVGSFGLGSWQVYRLQWKLNLIDRMQAISNAVP 391
           TK E     +W+LLLIPV +FGLG+WQV R +WKLNLI  +++   A P
Sbjct: 54  TKAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEP 102


>AL158826-12|CAI12837.1|  300|Homo sapiens surfeit 1 protein.
          Length = 300

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = +2

Query: 245 TKKEPLEIYKWILLLIPVGSFGLGSWQVYRLQWKLNLIDRMQAISNAVP 391
           TK E     +W+LLLIPV +FGLG+WQV R +WKLNLI  +++   A P
Sbjct: 54  TKAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEP 102


>AL158826-11|CAI12836.1|  270|Homo sapiens surfeit 1 protein.
          Length = 270

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = +2

Query: 245 TKKEPLEIYKWILLLIPVGSFGLGSWQVYRLQWKLNLIDRMQAISNAVP 391
           TK E     +W+LLLIPV +FGLG+WQV R +WKLNLI  +++   A P
Sbjct: 36  TKAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEP 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,055,700
Number of Sequences: 237096
Number of extensions: 966750
Number of successful extensions: 1740
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)