Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L06
         (503 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...   280   2e-77
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   4.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   4.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.9  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score =  280 bits (687), Expect = 2e-77
 Identities = 130/151 (86%), Positives = 145/151 (96%)
 Frame = +3

Query: 48  MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 227
           MGRMHAPGKGIS+SALPYRRSVP+WLKL+A+DVKEQI KLGKKG+TPSQIG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGV 60

Query: 228 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 407
           AQVRFV G K+LRIMKA+GL PD+PEDLY+LIKKAV++RKHLERNRKD DSKFRLIL+ES
Sbjct: 61  AQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIES 120

Query: 408 RIHRLARYYKTKSVLPPNWKYESSTASALVA 500
           RIHRLARYYK K+VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKIKAVLPPNWKYESSTASALVA 151


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +3

Query: 222 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 329
           G++ V+F+T ++   I  +MG+   L  D  Y+ ++
Sbjct: 443 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 478


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +3

Query: 222 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 329
           G++ V+F+T ++   I  +MG+   L  D  Y+ ++
Sbjct: 444 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 479


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 87   TGIYPCQVRAYDP-YWRLFIISPI*QRPS 4
            TG+Y  + R YDP   R + + P  Q PS
Sbjct: 2679 TGLYNYRARLYDPDIGRFYQMDPKEQYPS 2707


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 87   TGIYPCQVRAYDP-YWRLFIISPI*QRPS 4
            TG+Y  + R YDP   R + + P  Q PS
Sbjct: 2689 TGLYNYRARLYDPDIGRFYQMDPKEQYPS 2717


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,161
Number of Sequences: 2352
Number of extensions: 11717
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)