Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L04
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.9  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 37  C*RVRELDSRSDSTNRIS*ASTMPFKPADN 126
           C R R+LDS SDS   I   +  P KPA +
Sbjct: 568 CPRFRKLDSPSDS--GIESGTEKPDKPASS 595


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 540 AVAAFETLLVPPPSASQHLLSSVNI 466
           A+   ETL++PP    + +L S+ I
Sbjct: 455 AIPVRETLILPPRKRCKMILESMEI 479


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 184 HRQLAPRPRKLISRISG 134
           H QL P PR    ++SG
Sbjct: 378 HSQLCPTPRSTHLKVSG 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,285
Number of Sequences: 438
Number of extensions: 3645
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)