Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L02
         (486 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.28 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.28 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   1.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.4  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
 Frame = -1

Query: 300 TWSKNGLVNISSSKTN----VAKCNNNV---FIYFIVSVTMAAGFAICVFPIKCITIINH 142
           +W+K  LV     +TN      +CNN     F YF+ +++ A  FA+  + I    ++  
Sbjct: 157 SWAKVFLVEHILVQTNKLVLALECNNTTAEGFTYFLGNMSFAHIFALVEYDIFKALVLQT 216

Query: 141 VFYNHQLIFCYLDL 100
           +      I+ Y DL
Sbjct: 217 INLQITFIWTYNDL 230


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
 Frame = -1

Query: 300 TWSKNGLVNISSSKTN----VAKCNNNV---FIYFIVSVTMAAGFAICVFPIKCITIINH 142
           +W+K  LV     +TN      +CNN     F YF+ +++ A  FA+  + I    ++  
Sbjct: 157 SWAKVFLVEHILVQTNKLVLALECNNTTAEGFTYFLGNMSFAHIFALVEYDIFKALVLQT 216

Query: 141 VFYNHQLIFCYLDL 100
           +      I+ Y DL
Sbjct: 217 INLQITFIWTYNDL 230


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -3

Query: 232 CIYIFYCISHDGGGVRHLCISN*MYYYNKSCFLQPPTYILLFGFKDVKTLS*NNISKNF 56
           CIY FYC       +  LCI    YY+ ++  + P  +   F    +K+    N+ + F
Sbjct: 284 CIYYFYCAL-----IILLCI----YYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVVRPF 333



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -3

Query: 232 CIYIFYC 212
           CIY FYC
Sbjct: 145 CIYYFYC 151



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 35  FFFFLCYKIFTYVVL**CLYVF 100
           + FF  + IFT  +L  C ++F
Sbjct: 167 YHFFCAFIIFTMHLLFCCAFIF 188


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 281 RPFLLHVLNRGVFVYPRSEVVGIPPERDPQQFE 379
           +PFLL++ + G+ V PR +    P     Q FE
Sbjct: 378 QPFLLNIPSEGIKVEPRDKA---PSPYGGQMFE 407


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 232 CIYIFYCISHDGGGV 188
           C   +YC++++GG V
Sbjct: 434 CSIFYYCLAYNGGFV 448


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,694
Number of Sequences: 336
Number of extensions: 2546
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)