Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L02
         (486 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X76388-1|CAA53972.1|  599|Homo sapiens RNase L inhibitor protein.     123   3e-28
X74987-1|CAA52920.1|  402|Homo sapiens endoribonuclease protein.      123   3e-28
DQ148409-1|AAZ38723.1|  599|Homo sapiens ATP-binding cassette, s...   123   3e-28
BT009779-1|AAP88781.1|  599|Homo sapiens ATP-binding cassette, s...   123   3e-28
BC016988-1|AAH16988.1|  345|Homo sapiens Unknown (protein for IM...   123   3e-28
BC016283-1|AAH16283.1|  599|Homo sapiens ATP-binding cassette, s...   123   3e-28
AB062293-1|BAB93476.1|  599|Homo sapiens ATP-binding cassette su...   123   3e-28
AK128302-1|BAC87375.1|  142|Homo sapiens protein ( Homo sapiens ...    30   5.0  
U77129-1|AAB48435.1|  846|Homo sapiens KHS1 protein.                   29   8.7  
BC036013-1|AAH36013.1|  846|Homo sapiens mitogen-activated prote...    29   8.7  

>X76388-1|CAA53972.1|  599|Homo sapiens RNase L inhibitor protein.
          Length = 599

 Score =  123 bits (297), Expect = 3e-28
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = -3

Query: 484 MATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELLGITFRRDPNNFRPRINKHASV 305
           MATYLADRVIVF+G PS N  A++PQ+LL GMNKFL  L ITFRRDPNN+RPRINK  S+
Sbjct: 524 MATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSI 583

Query: 304 KDMEQKRSGQYFFLED 257
           KD+EQK+SG YFFL+D
Sbjct: 584 KDVEQKKSGNYFFLDD 599


>X74987-1|CAA52920.1|  402|Homo sapiens endoribonuclease protein.
          Length = 402

 Score =  123 bits (297), Expect = 3e-28
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = -3

Query: 484 MATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELLGITFRRDPNNFRPRINKHASV 305
           MATYLADRVIVF+G PS N  A++PQ+LL GMNKFL  L ITFRRDPNN+RPRINK  S+
Sbjct: 327 MATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSI 386

Query: 304 KDMEQKRSGQYFFLED 257
           KD+EQK+SG YFFL+D
Sbjct: 387 KDVEQKKSGNYFFLDD 402


>DQ148409-1|AAZ38723.1|  599|Homo sapiens ATP-binding cassette,
           sub-family E (OABP), member 1 protein.
          Length = 599

 Score =  123 bits (297), Expect = 3e-28
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = -3

Query: 484 MATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELLGITFRRDPNNFRPRINKHASV 305
           MATYLADRVIVF+G PS N  A++PQ+LL GMNKFL  L ITFRRDPNN+RPRINK  S+
Sbjct: 524 MATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSI 583

Query: 304 KDMEQKRSGQYFFLED 257
           KD+EQK+SG YFFL+D
Sbjct: 584 KDVEQKKSGNYFFLDD 599


>BT009779-1|AAP88781.1|  599|Homo sapiens ATP-binding cassette,
           sub-family E (OABP), member 1 protein.
          Length = 599

 Score =  123 bits (297), Expect = 3e-28
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = -3

Query: 484 MATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELLGITFRRDPNNFRPRINKHASV 305
           MATYLADRVIVF+G PS N  A++PQ+LL GMNKFL  L ITFRRDPNN+RPRINK  S+
Sbjct: 524 MATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSI 583

Query: 304 KDMEQKRSGQYFFLED 257
           KD+EQK+SG YFFL+D
Sbjct: 584 KDVEQKKSGNYFFLDD 599


>BC016988-1|AAH16988.1|  345|Homo sapiens Unknown (protein for
           IMAGE:4396587) protein.
          Length = 345

 Score =  123 bits (297), Expect = 3e-28
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = -3

Query: 484 MATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELLGITFRRDPNNFRPRINKHASV 305
           MATYLADRVIVF+G PS N  A++PQ+LL GMNKFL  L ITFRRDPNN+RPRINK  S+
Sbjct: 270 MATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSI 329

Query: 304 KDMEQKRSGQYFFLED 257
           KD+EQK+SG YFFL+D
Sbjct: 330 KDVEQKKSGNYFFLDD 345


>BC016283-1|AAH16283.1|  599|Homo sapiens ATP-binding cassette,
           sub-family E (OABP), member 1 protein.
          Length = 599

 Score =  123 bits (297), Expect = 3e-28
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = -3

Query: 484 MATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELLGITFRRDPNNFRPRINKHASV 305
           MATYLADRVIVF+G PS N  A++PQ+LL GMNKFL  L ITFRRDPNN+RPRINK  S+
Sbjct: 524 MATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSI 583

Query: 304 KDMEQKRSGQYFFLED 257
           KD+EQK+SG YFFL+D
Sbjct: 584 KDVEQKKSGNYFFLDD 599


>AB062293-1|BAB93476.1|  599|Homo sapiens ATP-binding cassette
           sub-family E member 1 protein.
          Length = 599

 Score =  123 bits (297), Expect = 3e-28
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = -3

Query: 484 MATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELLGITFRRDPNNFRPRINKHASV 305
           MATYLADRVIVF+G PS N  A++PQ+LL GMNKFL  L ITFRRDPNN+RPRINK  S+
Sbjct: 524 MATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSI 583

Query: 304 KDMEQKRSGQYFFLED 257
           KD+EQK+SG YFFL+D
Sbjct: 584 KDVEQKKSGNYFFLDD 599


>AK128302-1|BAC87375.1|  142|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46442 fis, clone THYMU3016822, moderately
           similar to Mus musculus macrophage erythroblast attacher
           (Maea). ).
          Length = 142

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +2

Query: 221 YINTLLLHLATLVFEEEILTRPFLLHVLNRGVFV 322
           Y NTL LHLATLV   +      +LH+  RGV++
Sbjct: 105 YFNTLTLHLATLVLPPQTAPSSRVLHL--RGVWM 136


>U77129-1|AAB48435.1|  846|Homo sapiens KHS1 protein.
          Length = 846

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 469 ADRVIVFEGTPSSNATAHAPQSLLNG 392
           +DRV+V E  P+ N TAH+   +L G
Sbjct: 816 SDRVVVLESRPTENPTAHSNLYILAG 841


>BC036013-1|AAH36013.1|  846|Homo sapiens mitogen-activated protein
           kinase kinase kinase kinase 5 protein.
          Length = 846

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 469 ADRVIVFEGTPSSNATAHAPQSLLNG 392
           +DRV+V E  P+ N TAH+   +L G
Sbjct: 816 SDRVVVLESRPTENPTAHSNLYILAG 841


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,782,854
Number of Sequences: 237096
Number of extensions: 1396398
Number of successful extensions: 3066
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3066
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)