Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_L02
         (486 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    25   0.43 
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    25   0.43 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.3  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   2.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   3.0  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   5.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   7.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.0  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +1

Query: 157 NTFNWKYTNGEPRRHRD*YNKIYKYIIVTFSYI 255
           N +N  Y N     + + Y K+YK  I+    I
Sbjct: 95  NNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQI 127


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +1

Query: 157 NTFNWKYTNGEPRRHRD*YNKIYKYIIVTFSYI 255
           N +N  Y N     + + Y K+YK  I+    I
Sbjct: 95  NNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQI 127


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 160 YYYNKSCFLQPPTYILLFGFKDVKT 86
           Y++  S  LQ   + L+FG  D KT
Sbjct: 168 YFFFNSEVLQKANHALIFGKLDTKT 192


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 160 YYYNKSCFLQPPTYILLFGFKDVKT 86
           Y++  S  LQ   + L+FG  D KT
Sbjct: 168 YFFFNSEVLQKANHALIFGKLDTKT 192


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = +1

Query: 133 VKNMIYYSNTFNWKYTNGEPRRHRD*YNKIYKYIIVTFSYI 255
           + N   YSN  N+         + + YN  YK +    +YI
Sbjct: 318 LSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINYI 358


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 307 QRRVCLSSVGSCWDPAG 357
           +   CLS+ GSC+ P G
Sbjct: 131 ESHACLSTGGSCYWPRG 147


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 314 VFVYPRSEVVGIPP 355
           V +YP  +V+ +PP
Sbjct: 131 VLIYPNGDVLWVPP 144


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 200 IVTDTIKYIN 229
           +VTDTIKY N
Sbjct: 252 VVTDTIKYRN 261


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 318 NTPLLRTWSKNGLVNISSS 262
           +TP+  TW K G + ++ S
Sbjct: 834 DTPVTVTWLKGGKIELNPS 852


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 318 NTPLLRTWSKNGLVNISSS 262
           +TP+  TW K G + ++ S
Sbjct: 830 DTPVTVTWLKGGKIELNPS 848


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,934
Number of Sequences: 438
Number of extensions: 3019
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)