Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K24
(345 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 88 8e-18
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 88 8e-18
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 88 8e-18
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 88 8e-18
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 88 8e-18
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 77 1e-14
Z98744-5|CAB11421.1| 226|Homo sapiens histone 1, H1b protein. 30 2.2
X83509-1|CAA58498.1| 226|Homo sapiens Histone H1.5 protein. 30 2.2
BC101583-1|AAI01584.1| 226|Homo sapiens histone cluster 1, H1b ... 30 2.2
BC101581-1|AAI01582.1| 226|Homo sapiens histone cluster 1, H1b ... 30 2.2
BC069101-1|AAH69101.1| 226|Homo sapiens histone cluster 1, H1b ... 30 2.2
AF531304-1|AAN06704.1| 226|Homo sapiens histone H1 protein. 30 2.2
M60747-1|AAA63186.1| 221|Homo sapiens histone H1 protein. 29 5.2
BC111971-1|AAI11972.1| 221|Homo sapiens histone cluster 1, H1d ... 29 5.2
BC104874-1|AAI04875.1| 221|Homo sapiens histone cluster 1, H1d ... 29 5.2
AL031777-11|CAB39189.1| 221|Homo sapiens histone 1, H1d protein. 29 5.2
AF531303-1|AAN06703.1| 221|Homo sapiens histone H1 protein. 29 5.2
Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain contai... 28 6.8
DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat ... 28 6.8
DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein. 28 6.8
DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein. 28 6.8
BC004303-1|AAH04303.1| 455|Homo sapiens TRIOBP protein protein. 28 6.8
BC003618-1|AAH03618.1| 593|Homo sapiens TRIOBP protein protein. 28 6.8
AF281030-1|AAG44841.1| 593|Homo sapiens Tara protein. 28 6.8
AB051449-1|BAB33332.2| 1653|Homo sapiens KIAA1662 protein protein. 28 6.8
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 87.8 bits (208), Expect = 8e-18
Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 185
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTK 263
R+ A+L GIRAKR K+AAE DV K
Sbjct: 186 RANARLFGIRAKRAKEAAE--QDVEK 209
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +3
Query: 63 KLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAE 242
KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE 61
>Z98744-5|CAB11421.1| 226|Homo sapiens histone 1, H1b protein.
Length = 226
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQ-YLRGA 185
F KK GEA + +K A + + P + A K+ + KA + G
Sbjct: 108 FKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGV 167
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ +AK K+ K AA+ P TK+P K KPK
Sbjct: 168 KKVAK----SPKKAKAAAK-PKKATKSPAKPKAVKPK 199
>X83509-1|CAA58498.1| 226|Homo sapiens Histone H1.5 protein.
Length = 226
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQ-YLRGA 185
F KK GEA + +K A + + P + A K+ + KA + G
Sbjct: 108 FKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGV 167
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ +AK K+ K AA+ P TK+P K KPK
Sbjct: 168 KKVAK----SPKKAKAAAK-PKKATKSPAKPKAVKPK 199
>BC101583-1|AAI01584.1| 226|Homo sapiens histone cluster 1, H1b
protein.
Length = 226
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQ-YLRGA 185
F KK GEA + +K A + + P + A K+ + KA + G
Sbjct: 108 FKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGV 167
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ +AK K+ K AA+ P TK+P K KPK
Sbjct: 168 KKVAK----SPKKAKAAAK-PKKATKSPAKPKAVKPK 199
>BC101581-1|AAI01582.1| 226|Homo sapiens histone cluster 1, H1b
protein.
Length = 226
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQ-YLRGA 185
F KK GEA + +K A + + P + A K+ + KA + G
Sbjct: 108 FKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGV 167
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ +AK K+ K AA+ P TK+P K KPK
Sbjct: 168 KKVAK----SPKKAKAAAK-PKKATKSPAKPKAVKPK 199
>BC069101-1|AAH69101.1| 226|Homo sapiens histone cluster 1, H1b
protein.
Length = 226
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQ-YLRGA 185
F KK GEA + +K A + + P + A K+ + KA + G
Sbjct: 108 FKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGV 167
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ +AK K+ K AA+ P TK+P K KPK
Sbjct: 168 KKVAK----SPKKAKAAAK-PKKATKSPAKPKAVKPK 199
>AF531304-1|AAN06704.1| 226|Homo sapiens histone H1 protein.
Length = 226
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQ-YLRGA 185
F KK GEA + +K A + + P + A K+ + KA + G
Sbjct: 108 FKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGV 167
Query: 186 RSIAKLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ +AK K+ K AA+ P TK+P K KPK
Sbjct: 168 KKVAK----SPKKAKAAAK-PKKATKSPAKPKAVKPK 199
>M60747-1|AAA63186.1| 221|Homo sapiens histone H1 protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 188
F KK GE + +K A + R P ++ PK VA T + K + ++
Sbjct: 106 FKLNKKAASGEGKPKAKKAGAAKPRKPAGAAKK--PKKVAGAATPKKSIKKTPKKVKKPA 163
Query: 189 SIA--KLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ A K V AK++K P K+P K KPK
Sbjct: 164 TAAGTKKVAKSAKKVK--TPQPKKAAKSPAKAKAPKPK 199
>BC111971-1|AAI11972.1| 221|Homo sapiens histone cluster 1, H1d
protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 188
F KK GE + +K A + R P ++ PK VA T + K + ++
Sbjct: 106 FKLNKKAASGEGKPKAKKAGAAKPRKPAGAAKK--PKKVAGAATPKKSIKKTPKKVKKPA 163
Query: 189 SIA--KLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ A K V AK++K P K+P K KPK
Sbjct: 164 TAAGTKKVAKSAKKVK--TPQPKKAAKSPAKAKAPKPK 199
>BC104874-1|AAI04875.1| 221|Homo sapiens histone cluster 1, H1d
protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 188
F KK GE + +K A + R P ++ PK VA T + K + ++
Sbjct: 106 FKLNKKAASGEGKPKAKKAGAAKPRKPAGAAKK--PKKVAGAATPKKSIKKTPKKVKKPA 163
Query: 189 SIA--KLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ A K V AK++K P K+P K KPK
Sbjct: 164 TAAGTKKVAKSAKKVK--TPQPKKAAKSPAKAKAPKPK 199
>AL031777-11|CAB39189.1| 221|Homo sapiens histone 1, H1d protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 188
F KK GE + +K A + R P ++ PK VA T + K + ++
Sbjct: 106 FKLNKKAASGEGKPKAKKAGAAKPRKPAGAAKK--PKKVAGAATPKKSIKKTPKKVKKPA 163
Query: 189 SIA--KLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ A K V AK++K P K+P K KPK
Sbjct: 164 TAAGTKKVAKSAKKVK--TPQPKKAAKSPAKAKAPKPK 199
>AF531303-1|AAN06703.1| 221|Homo sapiens histone H1 protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +3
Query: 12 FPKGKKVLKGEANEEERKL-ATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 188
F KK GE + +K A + R P ++ PK VA T + K + ++
Sbjct: 106 FKLNKKAASGEGKPKAKKAGAAKPRKPAGAAKK--PKKVAGAATPKKSIKKTPKKVKKPA 163
Query: 189 SIA--KLVGIRAKRLKDAAENPDDVTKAPTAVKETKPK 296
+ A K V AK++K P K+P K KPK
Sbjct: 164 TAAGTKKVAKSAKKVK--TPQPKKAAKSPAKAKAPKPK 199
>Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain containing
protein ).).
Length = 2193
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 42 EANEEERKL--ATQLRGPLMPVQQTAPKSVARPITEDEKN 155
+ +EE RK AT R P +P + + + P+TED++N
Sbjct: 1809 QRSEERRKWFEATDSRTPEVPAGEGPRRGLGAPLTEDQQN 1848
>DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat on
actin protein.
Length = 2266
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 42 EANEEERKL--ATQLRGPLMPVQQTAPKSVARPITEDEKN 155
+ +EE RK AT R P +P + + + P+TED++N
Sbjct: 1882 QRSEERRKWFEATDSRTPEVPAGEGPRRGLGAPLTEDQQN 1921
>DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein.
Length = 2365
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 42 EANEEERKL--ATQLRGPLMPVQQTAPKSVARPITEDEKN 155
+ +EE RK AT R P +P + + + P+TED++N
Sbjct: 1981 QRSEERRKWFEATDSRTPEVPAGEGPRRGLGAPLTEDQQN 2020
>DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein.
Length = 2193
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 42 EANEEERKL--ATQLRGPLMPVQQTAPKSVARPITEDEKN 155
+ +EE RK AT R P +P + + + P+TED++N
Sbjct: 1809 QRSEERRKWFEATDSRTPEVPAGEGPRRGLGAPLTEDQQN 1848
>BC004303-1|AAH04303.1| 455|Homo sapiens TRIOBP protein protein.
Length = 455
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 42 EANEEERKL--ATQLRGPLMPVQQTAPKSVARPITEDEKN 155
+ +EE RK AT R P +P + + + P+TED++N
Sbjct: 66 QRSEERRKWFEATDSRTPEVPAGEGPRRGLGAPLTEDQQN 105
>BC003618-1|AAH03618.1| 593|Homo sapiens TRIOBP protein protein.
Length = 593
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 42 EANEEERKL--ATQLRGPLMPVQQTAPKSVARPITEDEKN 155
+ +EE RK AT R P +P + + + P+TED++N
Sbjct: 209 QRSEERRKWFEATDSRTPEVPAGEGPRRGLGAPLTEDQQN 248
>AF281030-1|AAG44841.1| 593|Homo sapiens Tara protein.
Length = 593
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 42 EANEEERKL--ATQLRGPLMPVQQTAPKSVARPITEDEKN 155
+ +EE RK AT R P +P + + + P+TED++N
Sbjct: 209 QRSEERRKWFEATDSRTPEVPAGEGPRRGLGAPLTEDQQN 248
>AB051449-1|BAB33332.2| 1653|Homo sapiens KIAA1662 protein protein.
Length = 1653
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 42 EANEEERKL--ATQLRGPLMPVQQTAPKSVARPITEDEKN 155
+ +EE RK AT R P +P + + + P+TED++N
Sbjct: 1269 QRSEERRKWFEATDSRTPEVPAGEGPRRGLGAPLTEDQQN 1308
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,545,095
Number of Sequences: 237096
Number of extensions: 804733
Number of successful extensions: 5917
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5917
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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