Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K23
(503 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 72 2e-13
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 50 1e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 45 3e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 45 3e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 45 3e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 44 8e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 43 1e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 40 0.001
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 37 0.010
Z66495-13|CAA91278.1| 722|Caenorhabditis elegans Hypothetical p... 30 0.83
Z35602-3|CAA84672.1| 722|Caenorhabditis elegans Hypothetical pr... 30 0.83
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 30 1.1
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 29 1.9
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 1.9
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 1.9
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 1.9
AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine r... 29 1.9
Z92834-9|CAB07386.2| 192|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81089-2|CAB03136.1| 259|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL117195-3|CAB55009.1| 629|Caenorhabditis elegans Hypothetical ... 28 4.4
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 28 4.4
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 28 4.4
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 27 5.8
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 27 5.8
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 72.1 bits (169), Expect = 2e-13
Identities = 33/91 (36%), Positives = 54/91 (59%)
Frame = +3
Query: 231 MRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEAN 410
+R +W + +L P KDFY+ + +V R YE++ + + ++VT+ G VP P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 411 FPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 503
P + + + ++ PT IQ+ WPIAMSG
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSG 166
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/67 (40%), Positives = 41/67 (61%)
Frame = +3
Query: 297 KSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQA 476
K + + S + +R +++ G VP P+ ++EEA FPD V QA+K +GY +PTPIQ
Sbjct: 270 KELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQR 329
Query: 477 QGWPIAM 497
Q PI +
Sbjct: 330 QAIPIGL 336
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 58.8 bits (136), Expect = 2e-09
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = +3
Query: 255 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 434
+ Q FNK+FY H+ + +V +N + V G++ P P+ F +F + +A
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 435 IKSMGYKDPTPIQAQGWPIAMSG 503
I+ Y+ PTPIQA P A+SG
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSG 302
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 270 FNKDFYNPHKSVLDRSPYEVEDYRNKHE-VTVSGVEVPNPIEHFEEANFPDYVCQAIKSM 446
F K+FY + + + EV+ YR + + +TV G++ P PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 447 GYKDPTPIQAQGWPIAMSG 503
Y PT IQAQ P MSG
Sbjct: 323 EYSKPTSIQAQAIPSIMSG 341
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +3
Query: 354 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMS 500
V VSG VP IEHF EA F V + + GY PTP+Q P ++
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLA 175
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +3
Query: 354 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMS 500
V VSG VP IEHF EA F V + + GY PTP+Q P ++
Sbjct: 111 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLA 159
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +3
Query: 354 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMS 500
V VSG VP IEHF EA F V + + GY PTP+Q P ++
Sbjct: 108 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLA 156
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 43.6 bits (98), Expect = 8e-05
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Frame = +3
Query: 261 LQPFNKDFYNPHKSVLDRSPYEVED-YRNKHEVTV------SGVEVPNPIEHFEEANFPD 419
++P +D Y + SP ++++ Y N + V S V++P P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 420 Y-VCQAIKSMGYKDPTPIQAQGWPIAMSG 503
+ I+ G++ P+PIQ+Q WP+ +SG
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSG 121
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 285 YNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAI-KSMGYKDP 461
+ P + +S + E R + ++ G +P PI F E FP + + + K G P
Sbjct: 154 WRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTP 213
Query: 462 TPIQAQGWPIAMSG 503
T IQ QG P+A+SG
Sbjct: 214 TAIQIQGIPVALSG 227
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 354 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 503
V +G +VP PI F + + +++ + IK+ GY PTP+Q P G
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGG 203
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 36.7 bits (81), Expect = 0.010
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 396 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 503
FE+ N + +A GY DPTPIQ P+A++G
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTG 185
>Z66495-13|CAA91278.1| 722|Caenorhabditis elegans Hypothetical
protein R13G10.4 protein.
Length = 722
Score = 30.3 bits (65), Expect = 0.83
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +1
Query: 322 MK*RTIETNTKSLLVELKYLILLNILKRQTFQIMCVKQ*KVWVTKILPLYRLKD 483
+K RT++ K + +E+ +LLN +K F CV + + +K++ + ++D
Sbjct: 409 LKDRTVKFAVKYVNIEMNAHLLLNRMKTGDFHFACVVEYSAYDSKVVGIITIED 462
>Z35602-3|CAA84672.1| 722|Caenorhabditis elegans Hypothetical
protein R13G10.4 protein.
Length = 722
Score = 30.3 bits (65), Expect = 0.83
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +1
Query: 322 MK*RTIETNTKSLLVELKYLILLNILKRQTFQIMCVKQ*KVWVTKILPLYRLKD 483
+K RT++ K + +E+ +LLN +K F CV + + +K++ + ++D
Sbjct: 409 LKDRTVKFAVKYVNIEMNAHLLLNRMKTGDFHFACVVEYSAYDSKVVGIITIED 462
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +3
Query: 327 VEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWP 488
++D R + + G +PN I F +++ + + + P+PIQ Q P
Sbjct: 105 LDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIP 158
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 414 PDYVCQAIKSMGYKDPTPIQAQGWPIAM 497
P+ V +AI+ MG+ +PT IQ+ P A+
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAV 190
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 384 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 503
P + F EAN + + + + GY TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 384 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 503
P + F EAN + + + + GY TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 384 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 503
P + F EAN + + + + GY TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine
receptor, class z protein5 protein.
Length = 351
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 446 HTFYCLTHIIWKVCLFKMFNRIRYFNSTNSDFVFVSIVLYFI 321
H C+ +I +CLF+MF + N D V YFI
Sbjct: 64 HRLICVMLVILLLCLFEMFYGFKIMNMLELDLFDVLYHYYFI 105
>Z92834-9|CAB07386.2| 192|Caenorhabditis elegans Hypothetical
protein F39B2.5 protein.
Length = 192
Score = 28.3 bits (60), Expect = 3.3
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +3
Query: 258 SLQPF-NKDFYNPHKSV---LDRS---PYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFP 416
S QP+ ++D++N + + L++S E+ YR HE + V + P+ E
Sbjct: 76 SRQPYVSRDYWNLVEIIERSLEQSLTGQQEMLHYRRGHEAEAARVNLTRPLTKRELLPSL 135
Query: 417 DYVCQ-AIKSMGYKDPTP 467
Y+C+ +K+ K PTP
Sbjct: 136 QYLCRFTLKTSQQKPPTP 153
>Z81089-2|CAB03136.1| 259|Caenorhabditis elegans Hypothetical
protein F53H4.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 264 QPFNKDFYNPHKSVLDRSPYE-VEDYRNKHEVTVSGVEVPNPIEHFEEANFP 416
QP N+D Y + +L+ Y+ D N+++ G +VPNP E P
Sbjct: 200 QPNNRDTYL-NNLLLEIEEYDDFLDQVNQYKTRYPGAQVPNPYRSLPEGKLP 250
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 485 PSLSLYRGRIFVTHTFYCLTHIIWKVCL 402
P L Y + F+ TF+C+T K+CL
Sbjct: 3 PRLPRYFLKYFIIFTFFCVTFCFLKLCL 30
>AL117195-3|CAB55009.1| 629|Caenorhabditis elegans Hypothetical
protein Y57A10A.4 protein.
Length = 629
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 PHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEH-FEEANFPDY 422
PH +L+ P+E +D K+ V G P PIE F++ N D+
Sbjct: 416 PHVPILN-PPFESDDEEVKYIGAVKGQPKPGPIESVFDQINNRDH 459
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 423 VCQAIKSMGYKDPTPIQAQGWPIAMSG 503
V +AI+ G+ PTPIQ + P M G
Sbjct: 35 VYKAIEKKGFNQPTPIQRKTIPCIMDG 61
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 423 VCQAIKSMGYKDPTPIQAQGWPIAMSG 503
V +AI+ G+ PTPIQ + P M G
Sbjct: 35 VYKAIEKKGFNQPTPIQRKTIPCIMDG 61
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 384 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 503
P + F +++ P + + ++ GY TPIQ P+ G
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADG 335
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 384 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 503
P + F +++ P + + ++ GY TPIQ P+ G
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADG 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,325,239
Number of Sequences: 27780
Number of extensions: 186307
Number of successful extensions: 613
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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