Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_K22
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    29   0.049
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    24   1.4  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   2.4  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    23   2.4  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   5.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   7.5  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 0.049
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 273 TSMYCFINHVPVLNVNYIIKVFFFCYVPTPCV 178
           TS Y   +H   + V  I+ VF  C+VP  CV
Sbjct: 260 TSPYHVSDHKAAITVGVIMGVFLICWVPFFCV 291


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = -1

Query: 342 FNTCVRVQGSKYTDRFVVRYGTATSMYCFINHVPVLNVNYIIKVFFFCYVP 190
           F+TC     S +     + YGT   +Y   +    L++N ++ VF+   +P
Sbjct: 117 FSTC-----SSHPTAAFISYGTLFFIYVHPSATFSLDLNKVVSVFYTAVIP 162


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = -1

Query: 342 FNTCVRVQGSKYTDRFVVRYGTATSMYCFINHVPVLNVNYIIKVFFFCYVP 190
           F+TC     S +     + YGT   +Y   +    L++N ++ VF+   +P
Sbjct: 116 FSTC-----SSHPTAAFISYGTLFFIYVQPSATFSLDLNKVVSVFYTAVIP 161


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -3

Query: 421 YLKNKFVYARAICEFCFYYCPDVIVIF*HVRACPRLEIY*QVCCSLRYSDIY 266
           +L+N F      CE C Y C +  ++  H+++     +Y   C +  Y+  Y
Sbjct: 7   HLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKS--HSNVYQYRCANCTYATKY 56


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 144 LWLNYYFLFFIVKWLLTLY 88
           ++ NY+F F +V  L+ LY
Sbjct: 1   MFKNYHFFFILVITLIFLY 19


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 438 HAHNTPTHTHTYA 476
           H H TP H H++A
Sbjct: 425 HIHATPHHHHSHA 437


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 298 PVSIFRALDTHARVKILQLHQDNNRNRTHILRAHRQTYF 414
           P SIFR  D H     + +  D+N+  T I++    T +
Sbjct: 389 PRSIFRQTDDHQNSPSIFI-SDDNQKLTGIVQISNMTEY 426


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 156 YSTTLWLNYYFLFFIVKWLLTLYDKF 79
           +S TLW+       +V  +L L D+F
Sbjct: 564 FSNTLWILVMVSVHVVALVLYLLDRF 589


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,076
Number of Sequences: 438
Number of extensions: 3240
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)