Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K21
(533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 83 1e-16
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 64 8e-11
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 64 8e-11
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 58 5e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 58 5e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 58 5e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 56 1e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 56 1e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 56 1e-08
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 44 7e-05
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 44 7e-05
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 44 9e-05
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 44 9e-05
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 44 9e-05
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 42 4e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 42 4e-04
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 39 0.002
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.003
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.003
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 35 0.042
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 34 0.074
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 33 0.17
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 33 0.17
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 31 0.69
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 31 0.69
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 31 0.69
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 31 0.69
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 30 1.2
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 30 1.2
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 30 1.2
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 30 1.2
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 30 1.2
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 1.6
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 1.6
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 2.1
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.8
AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical ... 29 2.8
Z99270-3|CAL64001.1| 98|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z82258-5|CAL63989.1| 98|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 3.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 3.7
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 28 3.7
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 28 3.7
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 28 3.7
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical... 28 4.8
AC024808-4|AAK29924.1| 252|Caenorhabditis elegans Hypothetical ... 28 4.8
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 27 6.4
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 27 6.4
AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical... 27 6.4
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 27 6.4
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 27 6.4
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 6.4
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 6.4
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 8.5
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 27 8.5
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 27 8.5
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 27 8.5
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 27 8.5
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 8.5
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 27 8.5
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 27 8.5
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 8.5
AC006608-2|AAF39756.1| 1147|Caenorhabditis elegans Transformer :... 27 8.5
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 83.0 bits (196), Expect = 1e-16
Identities = 46/115 (40%), Positives = 55/115 (47%), Gaps = 29/115 (25%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDEP----------SCYNCNKTGHIARNCP----EGG------ 165
CY C TGH +R+C + SCYNC GH +R+CP EGG
Sbjct: 37 CYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGG 96
Query: 166 -----RDNSNQTCYNCNKSGHISRNCPDG----TKTCYVCGKPGHISRDCDEERN 303
R Q CYNC +SGHISR C + K CY C + GHISRDC + N
Sbjct: 97 RGGEGRSFGGQKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 79.8 bits (188), Expect = 1e-15
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 37/123 (30%)
Frame = +1
Query: 37 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRDNSNQ- 183
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 184 ------TCYNCNKSGHISRNCPD--------------------GTKTCYVCGKPGHISRD 285
+CYNC GH SR+CP G + CY CG+ GHISR+
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 286 CDE 294
C E
Sbjct: 122 CTE 124
Score = 74.5 bits (175), Expect = 4e-14
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 18/83 (21%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQ------TCYNCNKSGHISRNCPDGTK--------- 243
+CY C + GHI+RNCP G D + TCYNC ++GH SR+CP G
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGG 64
Query: 244 ---TCYVCGKPGHISRDCDEERN 303
+CY CG GH SRDC R+
Sbjct: 65 GGGSCYNCGGRGHYSRDCPSARS 87
Score = 57.6 bits (133), Expect = 5e-09
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +1
Query: 43 RCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNCP 156
+CY C +GHI+REC + S +E CY C +TGHI+R+CP
Sbjct: 108 KCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCP 147
Score = 33.1 bits (72), Expect = 0.13
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 34 EADRCYRCNGTGHIAREC 87
E RCY+C TGHI+R+C
Sbjct: 129 EEKRCYQCQETGHISRDC 146
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 63.7 bits (148), Expect = 8e-11
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHIS 219
C+ C GHI++EC P P C NC + GH A +C + C NC GH +
Sbjct: 572 CHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVPRG--PCRNCGIEGHFA 628
Query: 220 RNCPDGTKT----CYVCGKPGHISRDCDEER 300
+C D K C CG+ GH ++DC ER
Sbjct: 629 VDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-EGGRDNSNQTCYNCNKSGHI 216
C C GH A +C Q P P C NC + GH A++C E R + C C + GH
Sbjct: 618 CRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHW 676
Query: 217 SRNCPDGTK 243
CP K
Sbjct: 677 GYECPTRPK 685
Score = 33.5 bits (73), Expect = 0.098
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRD 171
C C GH A++C P EP C C + GH CP +D
Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEP-CRRCAEEGHWGYECPTRPKD 686
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 63.7 bits (148), Expect = 8e-11
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHIS 219
C+ C GHI++EC P P C NC + GH A +C + C NC GH +
Sbjct: 572 CHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVPRG--PCRNCGIEGHFA 628
Query: 220 RNCPDGTKT----CYVCGKPGHISRDCDEER 300
+C D K C CG+ GH ++DC ER
Sbjct: 629 VDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-EGGRDNSNQTCYNCNKSGHI 216
C C GH A +C Q P P C NC + GH A++C E R + C C + GH
Sbjct: 618 CRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHW 676
Query: 217 SRNCPDGTK 243
CP K
Sbjct: 677 GYECPTRPK 685
Score = 33.5 bits (73), Expect = 0.098
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRD 171
C C GH A++C P EP C C + GH CP +D
Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEP-CRRCAEEGHWGYECPTRPKD 686
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQ---SPDEPSCYNCNKTGHIARNCPEGG-RDNSNQTCYNCNKSGH 213
C+ C GH +C + S + C+ C H C + G + TC+ C + GH
Sbjct: 231 CFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGH 290
Query: 214 ISRNC--------PDGTKTCYVCGKPGHISRDCDE 294
ISR+C PDG C VCG H+ RDC E
Sbjct: 291 ISRDCHQNVNGVYPDG-GCCNVCGANTHLRRDCPE 324
Score = 58.0 bits (134), Expect = 4e-09
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC-PDGTK-----TCYVCGKPG 270
+C++C + GH +CP+ +S+ C+ C H C G K TC+VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 271 HISRDCDEERN 303
HISRDC + N
Sbjct: 290 HISRDCHQNVN 300
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +1
Query: 175 SNQTCYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISRDCDEE 297
+ C++C + GH +CP + C+ CG H +C ++
Sbjct: 227 TGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKK 272
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +1
Query: 160 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 300
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 57.6 bits (133), Expect = 5e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +1
Query: 160 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 300
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 362 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 57.6 bits (133), Expect = 5e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Frame = +1
Query: 28 QEEADRCYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHIARNCPEGGRDNSNQ- 183
+ E CY C GH +R+C + P E S + G EG +N +
Sbjct: 392 EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERG 451
Query: 184 --TCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 288
C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 452 PMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 15/103 (14%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE------------GG 165
E + C+ C GH + +C + E CYNC + GH +R+CPE G
Sbjct: 368 ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSG 427
Query: 166 RDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDCDE 294
N + + N G C+ C GH S +C E
Sbjct: 428 FGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNSNQTCYNCN 201
E + C+ C GH + +C + E CYNC + GH +R+CPE + + +
Sbjct: 254 ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGG 313
Query: 202 KSG 210
SG
Sbjct: 314 SSG 316
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 112 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 205 SGHISRNCPDGTKTCYVCGKPGHISRDCDEERN*HAP 315
SG ++ + C+ C +PGH S DC E + P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 205 SGHISRNCPDGTKTCYVCGKPGHISRDCDEERN*HAP 315
SG ++ + C+ C +PGH S DC E + P
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 395
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +1
Query: 160 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 300
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 57.6 bits (133), Expect = 5e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +1
Query: 160 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 300
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 362 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 57.6 bits (133), Expect = 5e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Frame = +1
Query: 28 QEEADRCYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHIARNCPEGGRDNSNQ- 183
+ E CY C GH +R+C + P E S + G EG +N +
Sbjct: 392 EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERG 451
Query: 184 --TCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 288
C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 452 PMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 15/103 (14%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE------------GG 165
E + C+ C GH + +C + E CYNC + GH +R+CPE G
Sbjct: 368 ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSG 427
Query: 166 RDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDCDE 294
N + + N G C+ C GH S +C E
Sbjct: 428 FGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNSNQTCYNCN 201
E + C+ C GH + +C + E CYNC + GH +R+CPE + + +
Sbjct: 254 ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGG 313
Query: 202 KSG 210
SG
Sbjct: 314 SSG 316
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 112 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 205 SGHISRNCPDGTKTCYVCGKPGHISRDCDEERN*HAP 315
SG ++ + C+ C +PGH S DC E + P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 205 SGHISRNCPDGTKTCYVCGKPGHISRDCDEERN*HAP 315
SG ++ + C+ C +PGH S DC E + P
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 395
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +1
Query: 160 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 300
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 57.6 bits (133), Expect = 5e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 57.6 bits (133), Expect = 5e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +1
Query: 160 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 300
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 362 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 57.6 bits (133), Expect = 5e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Frame = +1
Query: 28 QEEADRCYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHIARNCPEGGRDNSNQ- 183
+ E CY C GH +R+C + P E S + G EG +N +
Sbjct: 392 EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERG 451
Query: 184 --TCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 288
C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 452 PMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 15/103 (14%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE------------GG 165
E + C+ C GH + +C + E CYNC + GH +R+CPE G
Sbjct: 368 ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSG 427
Query: 166 RDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDCDE 294
N + + N G C+ C GH S +C E
Sbjct: 428 FGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNSNQTCYNCN 201
E + C+ C GH + +C + E CYNC + GH +R+CPE + + +
Sbjct: 254 ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGG 313
Query: 202 KSG 210
SG
Sbjct: 314 SSG 316
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 112 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 205 SGHISRNCPDGTKTCYVCGKPGHISRDCDEERN*HAP 315
SG ++ + C+ C +PGH S DC E + P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 205 SGHISRNCPDGTKTCYVCGKPGHISRDCDEERN*HAP 315
SG ++ + C+ C +PGH S DC E + P
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 395
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 56.4 bits (130), Expect = 1e-08
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Frame = +1
Query: 22 RLQEEADRCYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCPE----------GG 165
R + E CY C GH +REC + P E N GG
Sbjct: 177 RKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGG 236
Query: 166 RDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 288
+ C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 237 EERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +1
Query: 160 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 300
GG N+N C+NC + GH S +CP+ K CY C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 54.4 bits (125), Expect = 5e-08
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC + GH + +CPE ++ + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 44.4 bits (100), Expect = 5e-05
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 43 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 156
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 112 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNSNQT 186
E + C+ C GH + +C + E CYNC + GH +R C E + +T
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRT 209
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 247 CYVCGKPGHISRDCDEERN*HAP 315
C+ C +PGH S DC E R P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 56.4 bits (130), Expect = 1e-08
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Frame = +1
Query: 22 RLQEEADRCYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCPE----------GG 165
R + E CY C GH +REC + P E N GG
Sbjct: 177 RKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGG 236
Query: 166 RDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 288
+ C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 237 EERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +1
Query: 160 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 300
GG N+N C+NC + GH S +CP+ K CY C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 54.4 bits (125), Expect = 5e-08
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC + GH + +CPE ++ + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 44.4 bits (100), Expect = 5e-05
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 43 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 156
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 112 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNSNQT 186
E + C+ C GH + +C + E CYNC + GH +R C E + +T
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRT 209
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 247 CYVCGKPGHISRDCDEERN*HAP 315
C+ C +PGH S DC E R P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 56.4 bits (130), Expect = 1e-08
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Frame = +1
Query: 22 RLQEEADRCYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCPE----------GG 165
R + E CY C GH +REC + P E N GG
Sbjct: 177 RKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGG 236
Query: 166 RDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 288
+ C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 237 EERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +1
Query: 160 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 300
GG N+N C+NC + GH S +CP+ K CY C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 54.4 bits (125), Expect = 5e-08
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC + GH + +CPE ++ + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 44.4 bits (100), Expect = 5e-05
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 43 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 156
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 112 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNSNQT 186
E + C+ C GH + +C + E CYNC + GH +R C E + +T
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRT 209
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 247 CYVCGKPGHISRDCDEERN*HAP 315
C+ C +PGH S DC E R P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 154 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRDCDEERN*HAP 315
P G + + C+ C K + H +++CP+ K CY CG H+S C E R H P
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 159
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 16 LARLQEEADRCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 168
L R + + RC+RC H A+ C D CY C H++ CPE R
Sbjct: 103 LGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 155
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 154 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRDCDEERN*HAP 315
P G + + C+ C K + H +++CP+ K CY CG H+S C E R H P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 16 LARLQEEADRCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 168
L R + + RC+RC H A+ C D CY C H++ CPE R
Sbjct: 134 LGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 154 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRDCDEERN*HAP 315
P G + + C+ C K + H +++CP+ K CY CG H+S C E R H P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 16 LARLQEEADRCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 168
L R + + RC+RC H A+ C D CY C H++ CPE R
Sbjct: 134 LGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 154 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRDCDEERN*HAP 315
P G + + C+ C K + H +++CP+ K CY CG H+S C E R H P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 16 LARLQEEADRCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 168
L R + + RC+RC H A+ C D CY C H++ CPE R
Sbjct: 134 LGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 91 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 267
Q+P + C +C + G C + +DN++Q C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 268 GHISRDCDEE 297
GHI+ +C ++
Sbjct: 684 GHIAWNCPKK 693
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 28 QEEADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNC 198
Q +DRC C G C++ S D S C C ++G +C + N+ C+ C
Sbjct: 625 QNPSDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRC 680
Query: 199 NKSGHISRNCP 231
N+ GHI+ NCP
Sbjct: 681 NEMGHIAWNCP 691
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 37 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQ 183
+ +C C +G C + + +C+ CN+ GHIA NCP+ + S +
Sbjct: 653 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPKKNENTSEK 700
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 91 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 267
Q+P + C +C + G C + +DN++Q C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 268 GHISRDCDEE 297
GHI+ +C ++
Sbjct: 587 GHIAWNCPKK 596
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 28 QEEADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNC 198
Q +DRC C G C++ S D S C C ++G +C + N+ C+ C
Sbjct: 528 QNPSDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRC 583
Query: 199 NKSGHISRNCP 231
N+ GHI+ NCP
Sbjct: 584 NEMGHIAWNCP 594
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 37 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQ 183
+ +C C +G C + + +C+ CN+ GHIA NCP+ + S +
Sbjct: 556 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPKKNENTSEK 603
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 91 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 267
Q+P + C +C + G C + +DN++Q C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 268 GHISRDCDEE 297
GHI+ +C ++
Sbjct: 598 GHIAWNCPKK 607
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 28 QEEADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNC 198
Q +DRC C G C++ S D S C C ++G +C + N+ C+ C
Sbjct: 539 QNPSDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRC 594
Query: 199 NKSGHISRNCP 231
N+ GHI+ NCP
Sbjct: 595 NEMGHIAWNCP 605
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 37 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQ 183
+ +C C +G C + + +C+ CN+ GHIA NCP+ + S +
Sbjct: 567 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPKKNENTSEK 614
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPE-GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRD 285
+C+NC++ GH A CP G+ NQ ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 286 C 288
C
Sbjct: 265 C 265
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 34 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGH 213
+A C+ C+ GH A C P + N + + + ++ S+ TCY C + GH
Sbjct: 202 QAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGH 260
Query: 214 ISRNCPDG 237
+ C G
Sbjct: 261 YANRCHKG 268
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 41.5 bits (93), Expect = 4e-04
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 178 NQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 288
+ TC+NC K GH + C + C CG P H + +C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
Score = 33.9 bits (74), Expect = 0.074
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC K GH A C R+ C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.5 bits (73), Expect = 0.098
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 37 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 153
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 41.5 bits (93), Expect = 4e-04
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 178 NQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 288
+ TC+NC K GH + C + C CG P H + +C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
Score = 33.9 bits (74), Expect = 0.074
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 243
+C+NC K GH A C R+ C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.5 bits (73), Expect = 0.098
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 37 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 153
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 39.1 bits (87), Expect = 0.002
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 175 SNQTCYNCNKSGHISRNCPDG 237
S++ CY C + GHISRNCP+G
Sbjct: 2 SDRNCYKCQQPGHISRNCPNG 22
Score = 37.1 bits (82), Expect = 0.008
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNSNQ 183
+CY C + GHI+RNCP G D +
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRR 29
Score = 31.5 bits (68), Expect = 0.39
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 241 KTCYVCGKPGHISRDC 288
+ CY C +PGHISR+C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +1
Query: 37 ADR-CYRCNGTGHIAREC 87
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 112 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 228
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +1
Query: 187 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISRDCDEERN*HA 312
C NC H S CPD C CG GHIS+DC + +A
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKGMYA 476
Score = 35.5 bits (78), Expect = 0.024
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +1
Query: 43 RCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 162
RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 429 RCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 112 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 228
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +1
Query: 187 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISRDCDEERN*HA 312
C NC H S CPD C CG GHIS+DC + +A
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKGMYA 476
Score = 35.5 bits (78), Expect = 0.024
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +1
Query: 43 RCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 162
RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 429 RCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 34.7 bits (76), Expect = 0.042
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 210
CY+C GH++++C QS N KT H N E G N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 31.5 bits (68), Expect = 0.39
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 106 PSCYNCNKTGHIARNCPEGGRDN 174
P CY C GH++++CP+ ++
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 2.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 187 CYNCNKSGHISRNCPDGT 240
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 33.9 bits (74), Expect = 0.074
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Frame = +1
Query: 73 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGG---------RDNSNQTCYNCNKSGHIS 219
+ R+C Q +P + C+ C++ GH +CP+ NS + Y N SG
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGF 1401
Query: 220 RNCPDG 237
+N +G
Sbjct: 1402 KNGEEG 1407
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRN 225
C +C+GT + + SC CN TG +++ +GG TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRN 225
C +C+GT + + SC CN TG +++ +GG TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 31.9 bits (69), Expect = 0.30
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 79 RECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTC 249
+ C S D +C + C+ I + P SNQ+ Y C+ + CP+ K C
Sbjct: 78 KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECSALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 31.9 bits (69), Expect = 0.30
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 79 RECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTC 249
+ C S D +C + C+ I + P SNQ+ Y C+ + CP+ K C
Sbjct: 78 KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECSALCQMDGECPETQKCC 135
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 30.7 bits (66), Expect = 0.69
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 94 SPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 231
SP + +K R GR C++C + GHISR CP
Sbjct: 140 SPRSDGMGSSSKRPRSGRRTGRRGRGGPGH-CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 3.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 112 CYNCNKTGHIARNCPE 159
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 30.7 bits (66), Expect = 0.69
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = +1
Query: 25 LQEEADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC- 198
L +AD + C+ G + C + E C N T + + CP G D+ ++ C C
Sbjct: 250 LSGQADHMHSCSAAGMYS--CGRKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECA 305
Query: 199 -NKSGHISRNCPDGTKTCYVCGKPGHISRD---CDEE 297
+ H N P G + C +C + ++ D C++E
Sbjct: 306 RKRCDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 30.7 bits (66), Expect = 0.69
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 210
E + C C+GT + + D SC++C ++GH P N N T +SG
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH-----PSCLNFNQNVTKI-IKRSG 305
Query: 211 HISRNCPDGTKTCYVCG 261
C K+C +CG
Sbjct: 306 WQCLEC----KSCTICG 318
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 30.7 bits (66), Expect = 0.69
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +1
Query: 97 PDEPSCYNCNKTGHIARNC---PEGG-RDNSNQTCYNCNKSGHISRNCP 231
P+ C C + G +C P+ R+ C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 159
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 9/46 (19%)
Frame = +1
Query: 178 NQTCYNCNKSGHISRNCPDGTKT---------CYVCGKPGHISRDC 288
N C C + G +C KT C+ CG+ GHIS C
Sbjct: 578 NGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYC 623
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Frame = +1
Query: 25 LQEEADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC- 198
L +AD + C+ G + C E C N T + + CP G D+ ++ C C
Sbjct: 250 LSGQADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECA 305
Query: 199 -NKSGHISRNCPDGTKTCYVCGKPGHISRD---CDEE 297
+ H N P G + C +C + ++ D C++E
Sbjct: 306 RKRCDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +1
Query: 79 RECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTC 249
+ C D +C + C+ I + P SNQ+ Y C+ + CP+ K C
Sbjct: 78 KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECSALCQMDGECPETQKCC 135
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Frame = +1
Query: 25 LQEEADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC- 198
L +AD + C+ G + C E C N T + + CP G D+ ++ C C
Sbjct: 250 LSGQADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECA 305
Query: 199 -NKSGHISRNCPDGTKTCYVCGKPGHISRD---CDEE 297
+ H N P G + C +C + ++ D C++E
Sbjct: 306 RKRCDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Frame = +1
Query: 25 LQEEADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC- 198
L +AD + C+ G + C E C N T + + CP G D+ ++ C C
Sbjct: 250 LSGQADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECA 305
Query: 199 -NKSGHISRNCPDGTKTCYVCGKPGHISRD---CDEE 297
+ H N P G + C +C + ++ D C++E
Sbjct: 306 RKRCDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +1
Query: 151 CPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDCDEERN*HAPNNS*Y 330
CP +D+ QTC + + R C + + C +C P HI+ +C ++ NS
Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNCSYAQSMQDNTNS-- 979
Query: 331 FIINKNKQNN 360
I + +QN+
Sbjct: 980 -RIQRQRQNH 988
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 187 CYNCNKSGHISRNCPDGTKTCYVC 258
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 187 CYNCNKSGHISRNCPDGTKTCYVC 258
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 247 CYVCGKPGHISRDCDEERN*HAPN 318
CY CGK GH + +C +++ + N
Sbjct: 411 CYYCGKRGHTANECRRKKSDESQN 434
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 109 SCYNCNKTGHIARNCPEGGRDNS 177
+CY C K GH A C D S
Sbjct: 410 NCYYCGKRGHTANECRRKKSDES 432
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +1
Query: 67 GHIARECAQSPDEPSCYNCNKTGH----IARNCPE 159
GH R+C D P Y C K G I +NCP+
Sbjct: 55 GHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical
protein R02F11.1 protein.
Length = 176
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 112 CYNCNKTGHIARN-CPEGGRDNSNQTCYNCNKSGHISRNCPDGT-KTCYVCG 261
C + N TG CP G N+N C SG + +C +G T Y CG
Sbjct: 115 CQSGNSTGPCVNQVCPTGFMCNTNNYCCPLG-SGGVLGSCVNGVCPTGYTCG 165
>Z99270-3|CAL64001.1| 98|Caenorhabditis elegans Hypothetical
protein Y37A1A.4 protein.
Length = 98
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 207 RAHLAQLPRRHQDLLRLRQARTYLSRLRRGAELTRAQQLLIFYYKQ 344
R+H++ RRH ++ A + +LRRG L + +Y Q
Sbjct: 7 RSHISPTLRRHSSNVKTYDAIQFRDKLRRGVSLENIGPQRVCFYPQ 52
>Z82258-5|CAL63989.1| 98|Caenorhabditis elegans Hypothetical
protein Y37A1A.4 protein.
Length = 98
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 207 RAHLAQLPRRHQDLLRLRQARTYLSRLRRGAELTRAQQLLIFYYKQ 344
R+H++ RRH ++ A + +LRRG L + +Y Q
Sbjct: 7 RSHISPTLRRHSSNVKTYDAIQFRDKLRRGVSLENIGPQRVCFYPQ 52
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.3 bits (60), Expect = 3.7
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCY-NCNKSGHISR 222
C T +CA + DE Y CN R+CPE +N+ C + K HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 223 NCPDGT 240
+C DG+
Sbjct: 2858 DCGDGS 2863
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.3 bits (60), Expect = 3.7
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 46 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCY-NCNKSGHISR 222
C T +CA + DE Y CN R+CPE +N+ C + K HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 223 NCPDGT 240
+C DG+
Sbjct: 2858 DCGDGS 2863
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 28.3 bits (60), Expect = 3.7
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 GIGTSLARLQEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRDNS 177
G+G S+ R Q + D C G H A D+ Y C + G+ N + GR +
Sbjct: 1761 GLGESICRRQSDIDEC--ALGL-HNCSAAAICIDKKIGYECQCQEGYEDGNPSQPGRICA 1817
Query: 178 NQTCYNCNKSGHISRNCPDGTKTC 249
C CN G + TC
Sbjct: 1818 ASLCGLCNGHGDCIHDALSSNVTC 1841
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 28.3 bits (60), Expect = 3.7
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 GIGTSLARLQEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRDNS 177
G+G S+ R Q + D C G H A D+ Y C + G+ N + GR +
Sbjct: 1761 GLGESICRRQSDIDEC--ALGL-HNCSAAAICIDKKIGYECQCQEGYEDGNPSQPGRICA 1817
Query: 178 NQTCYNCNKSGHISRNCPDGTKTC 249
C CN G + TC
Sbjct: 1818 ASLCGLCNGHGDCIHDALSSNVTC 1841
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 28.3 bits (60), Expect = 3.7
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Frame = +1
Query: 112 CYNCNKTGHIARN--CP-----EGGRDNSNQT--CYNCNKSGHISRNCPDGTKTCYVCGK 264
C C+ T H+ R+ CP E + + C+ C +SGH C +TC C K
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371
Query: 265 PGHISRDCDEERN*HAPNN 321
H + C + N +A N
Sbjct: 372 GNHHTVFC-QSHNRNATRN 389
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/77 (22%), Positives = 27/77 (35%)
Frame = +1
Query: 55 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPD 234
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 235 GTKTCYVCGKPGHISRD 285
CG P +S++
Sbjct: 96 ANWNMQKCGIPHVVSKN 112
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 229 PD-GTKTCYVCGKPGHISRDCDEER 300
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 229 PD-GTKTCYVCGKPGHISRDCDEER 300
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 229 PD-GTKTCYVCGKPGHISRDCDEER 300
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical
protein Y73F8A.20 protein.
Length = 541
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 252 RLRQARTYLSRLRRGAELTRAQQLL 326
R+R RT +++ RR ++TR Q+LL
Sbjct: 430 RIRHRRTIITKKRRNTKITRKQRLL 454
>AC024808-4|AAK29924.1| 252|Caenorhabditis elegans Hypothetical
protein Y53G8AM.7 protein.
Length = 252
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 525 VSHGYRSLILHLFCYSIAFVNFFFIQSCGRSLR 427
VS G ++I LF Y +A + F F+Q CG+ ++
Sbjct: 193 VSCGLLTVIPLLFGYFVAKIFFKFVQICGKGVK 225
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.5 bits (58), Expect = 6.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Frame = +1
Query: 64 TGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCNKSGHI-- 216
T + A+ C S +E CN K G+ C G S ++C C +G+
Sbjct: 1887 TNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNL 1945
Query: 217 --SRNCPDGTKTCYVC 258
SR+C + CY+C
Sbjct: 1946 TDSRSCHPNSGDCYLC 1961
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNC 198
E C +CNG ++ + P+ CY C N G +C G + + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 199 NKSGHISRNCPDGTKTC 249
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.5 bits (58), Expect = 6.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Frame = +1
Query: 64 TGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCNKSGHI-- 216
T + A+ C S +E CN K G+ C G S ++C C +G+
Sbjct: 1887 TNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNL 1945
Query: 217 --SRNCPDGTKTCYVC 258
SR+C + CY+C
Sbjct: 1946 TDSRSCHPNSGDCYLC 1961
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNC 198
E C +CNG ++ + P+ CY C N G +C G + + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 199 NKSGHISRNCPDGTKTC 249
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical
protein F46C5.3 protein.
Length = 399
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 112 CYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 201
CY+ C G +A NC GG N N C CN
Sbjct: 236 CYDSCRNAGQLA-NCANGGIPNPN-NCQVCN 264
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 351 TKQLTMYIMMPRTDDKQRTRNA 416
TK LT+Y ++P T+DK+R A
Sbjct: 919 TKVLTVYPLIPSTEDKRRMEKA 940
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 52 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE----GGRDNSNQTCYNCNKS 207
+ N T + R+ + + C C+K+ HI P R+N C+ CN+S
Sbjct: 524 KMNYTCVVCRKSTEQHKQTQCDECHKSYHIGCLSPPLTRLPKRNNFGWICHECNES 579
>AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical
protein Y105C5A.17 protein.
Length = 337
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 163 GRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHI 276
GRDNSN+ + C + S C VC G++
Sbjct: 189 GRDNSNEEWHGCGTTDCTSAGCKKNADGSNVCCCQGYL 226
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 351 TKQLTMYIMMPRTDDKQRTRNA 416
TK LT+Y ++P T+DK+R A
Sbjct: 919 TKVLTVYPLIPSTEDKRRMEKA 940
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 327 LRVVG-RVLIPLLVAVARDMSGLAADV 250
L+V+ +VL+P LV +ARD LAA+V
Sbjct: 781 LQVISEQVLVPALVTMARDSEQLAAEV 807
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.5 bits (58), Expect = 6.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Frame = +1
Query: 64 TGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCNKSGHI-- 216
T + A+ C S +E CN K G+ C G S ++C C +G+
Sbjct: 1887 TNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNL 1945
Query: 217 --SRNCPDGTKTCYVC 258
SR+C + CY+C
Sbjct: 1946 TDSRSCHPNSGDCYLC 1961
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNC 198
E C +CNG ++ + P+ CY C N G +C G + + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 199 NKSGHISRNCPDGTKTC 249
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.5 bits (58), Expect = 6.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Frame = +1
Query: 64 TGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCNKSGHI-- 216
T + A+ C S +E CN K G+ C G S ++C C +G+
Sbjct: 1887 TNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNL 1945
Query: 217 --SRNCPDGTKTCYVC 258
SR+C + CY+C
Sbjct: 1946 TDSRSCHPNSGDCYLC 1961
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +1
Query: 31 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNC 198
E C +CNG ++ + P+ CY C N G +C G + + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 199 NKSGHISRNCPDGTKTC 249
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +1
Query: 10 TSLARLQEEADRCYRCNGTGHIAREC------AQSPDEPSCYNCNKT--GHIARNCPEGG 165
+ L+ +E+A R C+ G ++ C A++ +P C G C G
Sbjct: 410 SGLSHYREDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGY 469
Query: 166 RDNSNQTCYNCNKSGHISRNCPDG 237
R++ CN++G ++ + DG
Sbjct: 470 RNHPTCEPCPCNRAGSVNFDTCDG 493
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +1
Query: 100 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 228
+ P C C K+ + A GG ++ C+ CN + +C
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGY-KWHKFCFKCNMCNKLLDSC 48
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +1
Query: 100 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 228
+ P C C K+ + A GG ++ C+ CN + +C
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGY-KWHKFCFKCNMCNKLLDSC 48
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.1 bits (57), Expect = 8.5
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Frame = +1
Query: 52 RCNGTGHIARECAQSPDEPSCYNCNKTGH-IARNCPEGGR---------DNSNQTCYNCN 201
+C+G +C DE +C C K H +NC + + D S++ +C
Sbjct: 235 KCDGVS----DCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIPDCDDGSDEHQCDCK 290
Query: 202 K-SGHISRNCPDGT 240
SG C DGT
Sbjct: 291 TCSGSEKALCEDGT 304
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +1
Query: 19 ARLQEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRD 171
ARL C CN H ++ A D C C + H+ P GGRD
Sbjct: 199 ARLLCPLHCCNSCNLDHH--KQSAYVGDIAECALCLRAFHLTSCYPSGGRD 247
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +1
Query: 10 TSLARLQEEADRCYRCNGTGHIAREC------AQSPDEPSCYNCNKT--GHIARNCPEGG 165
+ L+ +E+A R C+ G ++ C A++ +P C G C G
Sbjct: 410 SGLSHYREDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGY 469
Query: 166 RDNSNQTCYNCNKSGHISRNCPDG 237
R++ CN++G ++ + DG
Sbjct: 470 RNHPTCEPCPCNRAGSVNFDTCDG 493
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +1
Query: 19 ARLQEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRD 171
ARL C CN H ++ A D C C + H+ P GGRD
Sbjct: 199 ARLLCPLHCCNSCNLDHH--KQSAYVGDIAECALCLRAFHLTSCYPSGGRD 247
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 27.1 bits (57), Expect = 8.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 112 CYNCNKTGHIARNC 153
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +1
Query: 10 TSLARLQEEADRCYRCNGTGHIAREC------AQSPDEPSCYNCNKT--GHIARNCPEGG 165
+ L+ +E+A R C+ G ++ C A++ +P C G C G
Sbjct: 410 SGLSHYREDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGY 469
Query: 166 RDNSNQTCYNCNKSGHISRNCPDG 237
R++ CN++G ++ + DG
Sbjct: 470 RNHPTCEPCPCNRAGSVNFDTCDG 493
>AC006608-2|AAF39756.1| 1147|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform b
protein.
Length = 1147
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 517 WIPFSHSASVLLFHSFCKFFFHTVMWSVLTS*CRAFR 407
W PFS S S S C FFFH+ S++ + FR
Sbjct: 1055 WWPFSSSRS-----SICSFFFHSHPSSIILATLSIFR 1086
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,916,251
Number of Sequences: 27780
Number of extensions: 227649
Number of successful extensions: 1173
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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