Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K20
(373 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 106 8e-24
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 106 8e-24
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 106 8e-24
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 106 8e-24
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 106 8e-24
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 47 7e-06
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 47 7e-06
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 40 8e-04
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 40 8e-04
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 40 8e-04
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 106 bits (255), Expect = 8e-24
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = +1
Query: 205 RRKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTSVAL 372
++KAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT++AL
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLAL 209
Score = 49.2 bits (112), Expect = 2e-06
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Frame = +3
Query: 9 PVHP---DINKTTAKGLFKILEKYRPETEQSGKSV*RXRRSQGC*ER*AATEKAKHP--- 170
P+H ++KTTA LFK+LEKYRPE+ + K+V R ++ + E K P
Sbjct: 84 PIHQFSQTLDKTTAVKLFKLLEKYRPESALA-KNV-RLKKIAEAKAKGKDVEPKKKPSYV 141
Query: 171 TAGTNTVTKLVEKK 212
+AGTNTVTKL+E+K
Sbjct: 142 SAGTNTVTKLIEQK 155
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 106 bits (255), Expect = 8e-24
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = +1
Query: 205 RRKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTSVAL 372
++KAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT++AL
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLAL 209
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Frame = +3
Query: 9 PVHP---DINKTTAKGLFKILEKYRPETEQSGK-SV*RXRRSQGC*ER*AATEKAKHPTA 176
P+H ++KTTA LFK+LEKYRPE+ + K + + ++ + +K + +A
Sbjct: 84 PIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSA 143
Query: 177 GTNTVTKLVEKK 212
GTNTVTKL+E+K
Sbjct: 144 GTNTVTKLIEQK 155
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 106 bits (255), Expect = 8e-24
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = +1
Query: 205 RRKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTSVAL 372
++KAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT++AL
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLAL 209
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Frame = +3
Query: 9 PVHP---DINKTTAKGLFKILEKYRPETEQSGK-SV*RXRRSQGC*ER*AATEKAKHPTA 176
P+H ++KTTA LFK+LEKYRPE+ + K + + ++ + +K + +A
Sbjct: 84 PIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSA 143
Query: 177 GTNTVTKLVEKK 212
GTNTVTKL+E+K
Sbjct: 144 GTNTVTKLIEQK 155
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 106 bits (255), Expect = 8e-24
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = +1
Query: 205 RRKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTSVAL 372
++KAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT++AL
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLAL 209
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Frame = +3
Query: 9 PVHP---DINKTTAKGLFKILEKYRPETEQSGK-SV*RXRRSQGC*ER*AATEKAKHPTA 176
P+H ++KTTA LFK+LEKYRPE+ + K + + ++ + +K + +A
Sbjct: 84 PIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSA 143
Query: 177 GTNTVTKLVEKK 212
GTNTVTKL+E+K
Sbjct: 144 GTNTVTKLIEQK 155
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 106 bits (255), Expect = 8e-24
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = +1
Query: 205 RRKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTSVAL 372
++KAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT++AL
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLAL 209
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Frame = +3
Query: 9 PVHP---DINKTTAKGLFKILEKYRPETEQSGK-SV*RXRRSQGC*ER*AATEKAKHPTA 176
P+H ++KTTA LFK+LEKYRPE+ + K + + ++ + +K + +A
Sbjct: 84 PIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSA 143
Query: 177 GTNTVTKLVEKK 212
GTNTVTKL+E+K
Sbjct: 144 GTNTVTKLIEQK 155
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 47.2 bits (107), Expect = 7e-06
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 205 RRKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 333
R A +VV+A D +PIE++L LP LC VPY V+ K LG
Sbjct: 47 RGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 47.2 bits (107), Expect = 7e-06
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 205 RRKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 333
R A +VV+A D +PIE++L LP LC VPY V+ K LG
Sbjct: 47 RGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 220 LVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTSVAL 372
+ + A DV P++++ LPA+C + G+PY ++ LGA + K T VAL
Sbjct: 85 ICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGT-VAL 134
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 220 LVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTSVAL 372
+ + A DV P++++ LPA+C + G+PY ++ LGA + K T VAL
Sbjct: 85 ICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGT-VAL 134
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 220 LVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTSVAL 372
+ + A DV P++++ LPA+C + G+PY ++ LGA + K T VAL
Sbjct: 85 ICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGT-VAL 134
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,536,299
Number of Sequences: 53049
Number of extensions: 258383
Number of successful extensions: 628
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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