Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_K15
         (551 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025467-10|AAB71040.2|  154|Caenorhabditis elegans He1 homologu...    47   8e-06
Z22179-5|CAA80162.2|  786|Caenorhabditis elegans Hypothetical pr...    36   0.019
Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical pr...    30   0.96 
AF016680-2|AAB66164.2|  253|Caenorhabditis elegans Hypothetical ...    30   0.96 
AF039049-10|AAB94247.1|  548|Caenorhabditis elegans Cytochrome p...    29   2.9  
Z99280-5|CAB16501.2|  413|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    28   5.1  
AL021469-2|CAA16289.2|   92|Caenorhabditis elegans Hypothetical ...    28   5.1  
AL032641-4|CAA21647.1|  454|Caenorhabditis elegans Hypothetical ...    27   6.8  
AF039049-12|AAB94245.1|  499|Caenorhabditis elegans Cytochrome p...    27   9.0  

>AF025467-10|AAB71040.2|  154|Caenorhabditis elegans He1 homologue
           protein 1 protein.
          Length = 154

 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
 Frame = +1

Query: 124 NDGCSVNEVRIDPCNTNHK-----CVLKQGTVGRMTVNFTPNFDASKVKFGLYWDNGGD- 285
           +DG +V++V+ D C    K     C+ K+G+   + + F P+ D  K+K  +    GG  
Sbjct: 27  SDG-TVSQVKADGCELTVKDGKKVCLFKKGSRPIIQIAFKPSKDTDKLKTSVRAKVGGSA 85

Query: 286 -VPFPDLQSDNACEY-TTCPLQAGQPKTLTYSLPIGKKVPKG-TFMFKCKFWNEENGSQS 456
            V FP   SD AC Y   CP+ AG+ +    S+ I +  P G       +    ++G + 
Sbjct: 86  MVDFPQTNSD-ACTYGVKCPVSAGENQIFEQSISITENHPAGEVIQVNWQLTRPDSGKEV 144

Query: 457 C 459
           C
Sbjct: 145 C 145


>Z22179-5|CAA80162.2|  786|Caenorhabditis elegans Hypothetical
           protein F58A4.5 protein.
          Length = 786

 Score = 35.9 bits (79), Expect = 0.019
 Identities = 19/68 (27%), Positives = 35/68 (51%)
 Frame = +1

Query: 241 ASKVKFGLYWDNGGDVPFPDLQSDNACEYTTCPLQAGQPKTLTYSLPIGKKVPKGTFMFK 420
           AS +K  + W+NGG++ F D+ +  +  Y    +       L +++P+G+K+P     F 
Sbjct: 99  ASNLKCNIAWENGGEIEFNDMWAPES-RYYGVAIDKMSIGGLWHTVPVGQKLP-----FV 152

Query: 421 CKFWNEEN 444
           C F  + N
Sbjct: 153 CTFQGKSN 160


>Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK1058.6 protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 0.96
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 349 GQPKTLTYSLPIGKKVPKGTFMFKCKFWN--EENGSQSCCFET 471
           G PK  ++ + +G + P+G   FK  F N  EENG +S   E+
Sbjct: 47  GYPKWNSFGITMGTRTPEGRKEFKRYFENAIEENGEESKLIES 89


>AF016680-2|AAB66164.2|  253|Caenorhabditis elegans Hypothetical
           protein R12A1.3 protein.
          Length = 253

 Score = 30.3 bits (65), Expect = 0.96
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 106 SCPGVSNDGCSVNEVRIDPCNTNHKCVLKQGTVGR 210
           +CP  +N G +      D CN++  C+ ++ TVG+
Sbjct: 207 ACPADANSGLNCLFAHADACNSDKDCLGRENTVGQ 241


>AF039049-10|AAB94247.1|  548|Caenorhabditis elegans Cytochrome p450
           family protein 35B1 protein.
          Length = 548

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 447 PVLFIPEFTFEHERTLRHLFPNG*GVRKCLG 355
           P  F PE   E+E+ L  + P G G R C+G
Sbjct: 465 PDKFYPERFIENEQLLSQIIPFGIGKRSCVG 495


>Z99280-5|CAB16501.2|  413|Caenorhabditis elegans Hypothetical
           protein Y57G11B.3 protein.
          Length = 413

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 268 WDNGGDVPFPDLQSDNACEYTTCPLQAGQP 357
           W NG  VP PDL+++      TCP +   P
Sbjct: 182 WTNGEMVPMPDLRAEMP---ATCPFKGNPP 208


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
            protein Y66D12A.14 protein.
          Length = 2870

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +1

Query: 232  NFDASKVKFGLYWDNGGDVPFPDLQSDNACEYTTCPLQAGQPKTLTYSLPIGKKVPKG 405
            +F+ SK+K   YW  GG+ P P    D+A       +Q   P T T +  I K + KG
Sbjct: 2357 SFNISKIKNLAYWVVGGE-PLPQSLLDSALALGIKVIQNYGP-TETTAFAIAKHMKKG 2412


>AL021469-2|CAA16289.2|   92|Caenorhabditis elegans Hypothetical
           protein Y116A8B.4 protein.
          Length = 92

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +1

Query: 34  YCCTSYSPFAYL*-GWPRRELAEIQSCPGVSNDGCSVNEVRIDPCNTNHKCVLKQGTVGR 210
           Y  TS +P   +  G P    +   S PG SN+    N  +I P +     +++  TV R
Sbjct: 22  YIVTSPTPTCLVESGHPEYSNSTFNS-PGSSNESQRPNYYQIQPPSPGEMVIVRTTTVTR 80

Query: 211 MTVNFTP 231
            T + TP
Sbjct: 81  NTTSITP 87


>AL032641-4|CAA21647.1|  454|Caenorhabditis elegans Hypothetical
           protein Y5F2A.4 protein.
          Length = 454

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = -2

Query: 214 SCARPFLVSERICDSYCKDRFGLR*PSSHHSKPQDRIEFRPTLSSANPKDRQTANTKYSN 35
           SC + F    + CDSY + R  L      H K   +  F PT  S   K  Q ++T   N
Sbjct: 180 SCLKKFAFVCKPCDSYFRQRVQL----DRHIK---KAHFHPTKCS---KCEQISDTPVQN 229

Query: 34  TMMSLVCAR 8
           +  SL C +
Sbjct: 230 SRHSLECVK 238


>AF039049-12|AAB94245.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 35B3 protein.
          Length = 499

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 447 PVLFIPEFTFEHERTLRHLFPNG*GVRKCLG 355
           P  F PE   E+ + L  + P G G R C+G
Sbjct: 416 PSKFYPERFIENGKLLNQIIPFGIGKRSCVG 446


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,231,458
Number of Sequences: 27780
Number of extensions: 310355
Number of successful extensions: 793
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)