Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K12
(527 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF160921-1|AAD46861.1| 536|Drosophila melanogaster BcDNA.LD0985... 135 3e-32
AE014134-2853|AAF53618.1| 536|Drosophila melanogaster CG6582-PA... 135 3e-32
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 30 1.7
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai... 30 1.7
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 30 1.7
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 30 1.7
AY089302-1|AAL90040.1| 349|Drosophila melanogaster AT10149p pro... 28 9.0
AE014298-3172|AAF50954.1| 395|Drosophila melanogaster CG14620-P... 28 9.0
>AF160921-1|AAD46861.1| 536|Drosophila melanogaster BcDNA.LD09852
protein.
Length = 536
Score = 135 bits (327), Expect = 3e-32
Identities = 77/173 (44%), Positives = 104/173 (60%), Gaps = 3/173 (1%)
Frame = +3
Query: 15 WKDIATTEAGSDSKLDLLKIFAEITENCGDLEDPQQKIDAVYDLLMEYLPEAPADSEQRS 194
W IAT + +L LLK+FAE+ N L++ ++I+AVY++L+EY+P E
Sbjct: 277 WNMIATAVSQDQIQLRLLKVFAEMITNTDKLDNASERINAVYNVLLEYMPLPKLSDEDLG 336
Query: 195 XXXXXXXXXXXXISVPSLQFSHVECALFALHSLCRKSPESLS--ADVEKLKSLRLRLQYT 368
+ PS QFSH EC L+ALH+L + P SLS D EKLK R RLQY
Sbjct: 337 D------------TPPSFQFSHAECLLYALHTLGKNHPNSLSFVEDAEKLKDFRARLQYL 384
Query: 369 AR*LRLY-QKVKRSHTGSKGDDTNSEENKLKIVALKTTSNINTLIRDIFRTPP 524
AR + Y +K++ S G G++ +EEN+LK ALKTTSNIN LIRD+F +PP
Sbjct: 385 ARGTQGYIKKLEESLKGKTGEELKTEENQLKQTALKTTSNINILIRDLFHSPP 437
>AE014134-2853|AAF53618.1| 536|Drosophila melanogaster CG6582-PA
protein.
Length = 536
Score = 135 bits (327), Expect = 3e-32
Identities = 77/173 (44%), Positives = 104/173 (60%), Gaps = 3/173 (1%)
Frame = +3
Query: 15 WKDIATTEAGSDSKLDLLKIFAEITENCGDLEDPQQKIDAVYDLLMEYLPEAPADSEQRS 194
W IAT + +L LLK+FAE+ N L++ ++I+AVY++L+EY+P E
Sbjct: 277 WNMIATAVSQDQIQLRLLKVFAEMITNTDKLDNASERINAVYNVLLEYMPLPKLSDEDLG 336
Query: 195 XXXXXXXXXXXXISVPSLQFSHVECALFALHSLCRKSPESLS--ADVEKLKSLRLRLQYT 368
+ PS QFSH EC L+ALH+L + P SLS D EKLK R RLQY
Sbjct: 337 D------------TPPSFQFSHAECLLYALHTLGKNHPNSLSFVEDAEKLKDFRARLQYL 384
Query: 369 AR*LRLY-QKVKRSHTGSKGDDTNSEENKLKIVALKTTSNINTLIRDIFRTPP 524
AR + Y +K++ S G G++ +EEN+LK ALKTTSNIN LIRD+F +PP
Sbjct: 385 ARGTQGYIKKLEESLKGKTGEELKTEENQLKQTALKTTSNINILIRDLFHSPP 437
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 337 NFSTSA-LKDSGDFLHNECRANKAHSTCENWSDG 239
NF+TS + +SGD +H EC+ CE+ ++G
Sbjct: 1869 NFATSCEISESGDQIHCECKPGYTGPRCESCANG 1902
>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
protein.
Length = 1951
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 337 NFSTSA-LKDSGDFLHNECRANKAHSTCENWSDG 239
NF+TS + +SGD +H EC+ CE+ ++G
Sbjct: 108 NFATSCEISESGDQIHCECKPGYTGPRCESCANG 141
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 337 NFSTSA-LKDSGDFLHNECRANKAHSTCENWSDG 239
NF+TS + +SGD +H EC+ CE+ ++G
Sbjct: 1869 NFATSCEISESGDQIHCECKPGYTGPRCESCANG 1902
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 337 NFSTSA-LKDSGDFLHNECRANKAHSTCENWSDG 239
NF+TS + +SGD +H EC+ CE+ ++G
Sbjct: 1869 NFATSCEISESGDQIHCECKPGYTGPRCESCANG 1902
>AY089302-1|AAL90040.1| 349|Drosophila melanogaster AT10149p
protein.
Length = 349
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +3
Query: 48 DSKLDLLKIFAEITENCGDLEDPQQKIDAVYDLLMEYLPE 167
+ ++ + K + + E+C +ED +++I A + E+ PE
Sbjct: 136 EQRIRVAKQQSALAEHCAGIEDEEERIKAFWQAKSEHCPE 175
>AE014298-3172|AAF50954.1| 395|Drosophila melanogaster CG14620-PA
protein.
Length = 395
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +3
Query: 48 DSKLDLLKIFAEITENCGDLEDPQQKIDAVYDLLMEYLPE 167
+ ++ + K + + E+C +ED +++I A + E+ PE
Sbjct: 182 EQRIRVAKQQSALAEHCAGIEDEEERIKAFWQAKSEHCPE 221
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,526,635
Number of Sequences: 53049
Number of extensions: 377855
Number of successful extensions: 1352
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -