Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K10
(534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 114 4e-26
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 112 2e-25
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 73 1e-13
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 50 1e-06
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 49 3e-06
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 47 8e-06
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 47 8e-06
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 35 0.047
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 35 0.047
03_05_0261 - 22470565-22470714,22472101-22474270,22474368-224745... 29 2.4
01_01_0437 - 3293624-3294029,3294094-3294212 29 2.4
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 29 3.1
02_05_1227 - 35076047-35076217,35076737-35076797,35077038-350771... 28 4.1
11_01_0750 - 6315126-6315896,6316371-6316784 28 5.4
11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610 27 7.2
08_01_0139 + 1105857-1107008,1107124-1107328,1107583-1107768,110... 27 7.2
04_04_0620 + 26656072-26656417,26656585-26657396 27 7.2
03_05_0776 + 27625122-27625415,27627226-27627273,27627455-276275... 27 7.2
02_04_0134 - 20109610-20109984 27 7.2
07_03_0909 + 22512313-22512474,22513151-22513465,22513539-225166... 27 9.5
06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991 27 9.5
04_04_0619 + 26652923-26653267,26653440-26654273 27 9.5
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 114 bits (275), Expect = 4e-26
Identities = 52/79 (65%), Positives = 67/79 (84%)
Frame = +3
Query: 87 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL 266
K+P ++ G N VT L+E+ KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RL
Sbjct: 123 KKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARL 182
Query: 267 GALVHRKTCTSVALTNVES 323
G++VH+KT + + LT V++
Sbjct: 183 GSIVHKKTASVLCLTTVKN 201
Score = 67.3 bits (157), Expect = 7e-12
Identities = 27/54 (50%), Positives = 42/54 (77%)
Frame = +2
Query: 326 NRAAFSKVVEAIKTNFNERYEELRRHWGGGVLGNKSNARIAKLEKAKAREIAQK 487
++ FSK++EAIK NFN++++E+R+ WGGGV+G+KS A+ EK A+E AQ+
Sbjct: 203 DKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQR 256
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 112 bits (269), Expect = 2e-25
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +3
Query: 87 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL 266
K+P ++ G + VT L+E+ KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RL
Sbjct: 108 KKPIVVKYGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 167
Query: 267 GALVHRKTCTSVALTNVES 323
G++VH+KT + + LT V++
Sbjct: 168 GSIVHKKTASVLCLTTVKN 186
Score = 67.3 bits (157), Expect = 7e-12
Identities = 26/54 (48%), Positives = 43/54 (79%)
Frame = +2
Query: 326 NRAAFSKVVEAIKTNFNERYEELRRHWGGGVLGNKSNARIAKLEKAKAREIAQK 487
++ FSK++EAIK+NFN++++E+R+ WGGG++G+KS A+ EK A+E AQ+
Sbjct: 188 DKLEFSKILEAIKSNFNDKFDEVRKKWGGGIMGSKSQAKTKAREKLLAKEAAQR 241
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 72.9 bits (171), Expect = 1e-13
Identities = 40/79 (50%), Positives = 53/79 (67%)
Frame = +3
Query: 87 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL 266
K+P ++ G N VT L+E+ KAQLVVIAHDVDPIELV++LPALCRKM
Sbjct: 107 KKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKM------------- 153
Query: 267 GALVHRKTCTSVALTNVES 323
+VH+KT + + LT V++
Sbjct: 154 -EIVHKKTASVLCLTTVKN 171
Score = 67.3 bits (157), Expect = 7e-12
Identities = 27/54 (50%), Positives = 42/54 (77%)
Frame = +2
Query: 326 NRAAFSKVVEAIKTNFNERYEELRRHWGGGVLGNKSNARIAKLEKAKAREIAQK 487
++ FSK++EAIK NFN++++E+R+ WGGGV+G+KS A+ EK A+E AQ+
Sbjct: 173 DKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQR 226
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +3
Query: 102 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 269
L+ G N TK + + A+ VV+A D +P+E++L LP L VPY V K LG
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALG 88
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 102 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 269
L+ G N TK + + ++ VV+A D +P+E++L LP L VPY V K LG
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALG 90
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 47.2 bits (107), Expect = 8e-06
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 102 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GAL 275
L+ G V K + + + L +IA ++ PI+++ +P LC + +PY V K L
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLATAGT 104
Query: 276 VHRKTCTSVALTNVESG 326
R TC + LT G
Sbjct: 105 TKRPTCCVLVLTKPAKG 121
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 47.2 bits (107), Expect = 8e-06
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 102 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GAL 275
L+ G V K + + L VIA ++ PI+++ +P LC + +PY V K L
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLATAGT 104
Query: 276 VHRKTCTSVALTNVESGTV 332
R TC + +T G +
Sbjct: 105 TKRPTCCVLVMTKPAKGEI 123
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3
Query: 111 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 269
G K +EK AQL V+A D D + V + ALC + V V LG
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3
Query: 111 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 269
G K +EK AQL V+A D D + V + ALC + V V LG
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93
>03_05_0261 -
22470565-22470714,22472101-22474270,22474368-22474540,
22474763-22474924,22476420-22476560
Length = 931
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 380 RYEELRRHWGGGVLGNKSNARIAKLEKAK 466
R +EL WGG LGN ++K+EK K
Sbjct: 854 REKELMDAWGGVGLGNSMKPHLSKIEKDK 882
>01_01_0437 - 3293624-3294029,3294094-3294212
Length = 174
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 78 PPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVD 182
PPP + R GT+++ + KA++ VI HD +
Sbjct: 34 PPPPQQQAARKGTHSLEGVKPLPKAEVSVICHDAN 68
>10_07_0130 +
13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 352 HYLREGGTVPDSTFVRATLVQVLRCTSAP 266
H E T D T V+AT + VL C +AP
Sbjct: 452 HQTVENPTAGDETNVQATTINVLACNAAP 480
>02_05_1227 -
35076047-35076217,35076737-35076797,35077038-35077123,
35077213-35077301,35077685-35077766,35078094-35078136,
35078211-35078284,35078492-35078561,35078747-35078816,
35079275-35079369,35079473-35079549,35080725-35080760
Length = 317
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 259 HDWV-RLYTVRLARASLLQMWSLEPCRLLEGSGS 357
HDWV L ++L RA+L WS + + GSG+
Sbjct: 46 HDWVPTLVILKLNRAALCVQWSPKENKFAVGSGA 79
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 278 YKRTQS*FTLHDTVRDSHLTAKRWQEEHKFDWVYVMSDDH 159
Y RT+ F +HD + L K+ + E KF + DDH
Sbjct: 214 YDRTRL-FAVHDNFKVIKLPYKQGKNERKFSMYIFLPDDH 252
>11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610
Length = 439
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = -3
Query: 340 EGGTVPDSTFVRATLVQVLRCTSAPNRDLPFTIQYGTPILRQSAGRKSTSSIGSTS*AMT 161
+ G P+ + A +R T D P T++YGT ++G+ S+ GST+ T
Sbjct: 51 DDGRKPEQVHISAVGSDKMRVTWITGGDAPATVEYGT-----TSGQYPFSATGSTN---T 102
Query: 160 TSCAFFFSTSLVTVLV 113
S + S ++ V++
Sbjct: 103 YSYVLYHSGNIHDVVI 118
>08_01_0139 +
1105857-1107008,1107124-1107328,1107583-1107768,
1107924-1108133,1108552-1109186
Length = 795
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 219 RKMGVPYCIVKGKSRLGALVHRKTCTSV 302
R + P I+K +R+ A +H +TC+SV
Sbjct: 87 RLVNSPINIIKANARVKAALHNQTCSSV 114
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 75 EPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDP 185
+PP P + A + +VE KKAQ++ + H +DP
Sbjct: 344 QPPRPPPMSFVAEHPFMFAIVEYKKAQVLFLGHVMDP 380
>03_05_0776 +
27625122-27625415,27627226-27627273,27627455-27627514,
27627633-27627802,27627901-27627973,27628096-27628161,
27628262-27628345,27628681-27628758,27629009-27629092,
27629835-27630137,27630227-27630397,27630971-27631161,
27631284-27631686,27632246-27632497,27632577-27633077,
27633181-27633278,27633400-27633499,27633722-27633867,
27633973-27634138
Length = 1095
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 259 DLPFTIQYGTPILRQSAGRKSTSSIGS 179
D+PF Y P++R + GRK + S+G+
Sbjct: 670 DVPFEKVYLHPMIRDAHGRKMSKSLGN 696
>02_04_0134 - 20109610-20109984
Length = 124
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 32 ASKESRRSQGC*ER*AATEKAKHPTRWNQHCYQAC*EEEGTACGHRS*RRP 184
A+ + R Q C E+ AA + + RW + C C + + C RRP
Sbjct: 15 AASRAERRQACSEQGAAKQARRLERRWAKQC--GCRQPQSEWCVANQCRRP 63
>07_03_0909 + 22512313-22512474,22513151-22513465,22513539-22516633,
22516812-22516910,22517031-22517379
Length = 1339
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 111 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYC 242
G TV L++ KK +++ +AHD+ L P K+ + YC
Sbjct: 1040 GVFTVAGLLKFKKEEILQLAHDLCDEFQALGKPGDAAKIALEYC 1083
>06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991
Length = 276
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 470 APSPSPAWRYARSTCYRGRHRPSVCVTLRNA 378
APSPSP A + GRH V R+A
Sbjct: 153 APSPSPQMHAASRRHHHGRHHQQVAPKARSA 183
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 75 EPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDP 185
E P RP + A + +VE +KAQ++ + H +DP
Sbjct: 352 ESPKPRPMSFVAEHPFMFAIVEYEKAQVLFLGHVMDP 388
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,794,136
Number of Sequences: 37544
Number of extensions: 295051
Number of successful extensions: 934
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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