Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_K10
(534 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 142 3e-34
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 142 3e-34
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 142 3e-34
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 142 3e-34
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 142 3e-34
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 60 2e-09
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 60 2e-09
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 47 2e-05
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 47 2e-05
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 47 2e-05
M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degene... 32 0.43
BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p pro... 32 0.43
AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA... 32 0.43
AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD... 32 0.43
AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC... 32 0.43
AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB... 32 0.43
AY122076-1|AAM52588.1| 921|Drosophila melanogaster AT18175p pro... 31 0.75
AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA... 31 0.75
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 29 4.0
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 29 4.0
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 29 4.0
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 29 4.0
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 142 bits (344), Expect = 3e-34
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +3
Query: 72 DEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVK 251
D P K+P+ + AGTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVK
Sbjct: 131 DVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVK 190
Query: 252 GKSRLGALVHRKTCTSVALTNVES 323
GK+RLG LV RKTCT++ALT V++
Sbjct: 191 GKARLGRLVRRKTCTTLALTTVDN 214
Score = 97.5 bits (232), Expect = 1e-20
Identities = 42/56 (75%), Positives = 53/56 (94%)
Frame = +2
Query: 326 NRAAFSKVVEAIKTNFNERYEELRRHWGGGVLGNKSNARIAKLEKAKAREIAQKQG 493
++A F KV+EA+KTNFNER+EE+RRHWGGG+LG+KS ARI+KLE+AKARE+AQKQG
Sbjct: 216 DKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARISKLERAKARELAQKQG 271
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 142 bits (344), Expect = 3e-34
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +3
Query: 72 DEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVK 251
D P K+P+ + AGTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVK
Sbjct: 131 DVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVK 190
Query: 252 GKSRLGALVHRKTCTSVALTNVES 323
GK+RLG LV RKTCT++ALT V++
Sbjct: 191 GKARLGRLVRRKTCTTLALTTVDN 214
Score = 97.5 bits (232), Expect = 1e-20
Identities = 42/56 (75%), Positives = 53/56 (94%)
Frame = +2
Query: 326 NRAAFSKVVEAIKTNFNERYEELRRHWGGGVLGNKSNARIAKLEKAKAREIAQKQG 493
++A F KV+EA+KTNFNER+EE+RRHWGGG+LG+KS ARI+KLE+AKARE+AQKQG
Sbjct: 216 DKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARISKLERAKARELAQKQG 271
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 142 bits (344), Expect = 3e-34
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +3
Query: 72 DEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVK 251
D P K+P+ + AGTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVK
Sbjct: 131 DVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVK 190
Query: 252 GKSRLGALVHRKTCTSVALTNVES 323
GK+RLG LV RKTCT++ALT V++
Sbjct: 191 GKARLGRLVRRKTCTTLALTTVDN 214
Score = 97.5 bits (232), Expect = 1e-20
Identities = 42/56 (75%), Positives = 53/56 (94%)
Frame = +2
Query: 326 NRAAFSKVVEAIKTNFNERYEELRRHWGGGVLGNKSNARIAKLEKAKAREIAQKQG 493
++A F KV+EA+KTNFNER+EE+RRHWGGG+LG+KS ARI+KLE+AKARE+AQKQG
Sbjct: 216 DKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARISKLERAKARELAQKQG 271
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 142 bits (344), Expect = 3e-34
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +3
Query: 72 DEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVK 251
D P K+P+ + AGTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVK
Sbjct: 131 DVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVK 190
Query: 252 GKSRLGALVHRKTCTSVALTNVES 323
GK+RLG LV RKTCT++ALT V++
Sbjct: 191 GKARLGRLVRRKTCTTLALTTVDN 214
Score = 97.5 bits (232), Expect = 1e-20
Identities = 42/56 (75%), Positives = 53/56 (94%)
Frame = +2
Query: 326 NRAAFSKVVEAIKTNFNERYEELRRHWGGGVLGNKSNARIAKLEKAKAREIAQKQG 493
++A F KV+EA+KTNFNER+EE+RRHWGGG+LG+KS ARI+KLE+AKARE+AQKQG
Sbjct: 216 DKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARISKLERAKARELAQKQG 271
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 142 bits (344), Expect = 3e-34
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +3
Query: 72 DEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVK 251
D P K+P+ + AGTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVK
Sbjct: 131 DVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVK 190
Query: 252 GKSRLGALVHRKTCTSVALTNVES 323
GK+RLG LV RKTCT++ALT V++
Sbjct: 191 GKARLGRLVRRKTCTTLALTTVDN 214
Score = 97.5 bits (232), Expect = 1e-20
Identities = 42/56 (75%), Positives = 53/56 (94%)
Frame = +2
Query: 326 NRAAFSKVVEAIKTNFNERYEELRRHWGGGVLGNKSNARIAKLEKAKAREIAQKQG 493
++A F KV+EA+KTNFNER+EE+RRHWGGG+LG+KS ARI+KLE+AKARE+AQKQG
Sbjct: 216 DKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARISKLERAKARELAQKQG 271
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +3
Query: 96 NTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 269
N LR G N TK + + A +VV+A D +PIE++L LP LC VPY V+ K LG
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +3
Query: 96 NTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 269
N LR G N TK + + A +VV+A D +PIE++L LP LC VPY V+ K LG
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +3
Query: 87 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL 266
K LR G V + K + + + A DV P++++ LPA+C + G+PY ++ L
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADL 121
Query: 267 GALVHRKTCTSVAL 308
GA + K T VAL
Sbjct: 122 GAAMGVKRGT-VAL 134
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +3
Query: 87 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL 266
K LR G V + K + + + A DV P++++ LPA+C + G+PY ++ L
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADL 121
Query: 267 GALVHRKTCTSVAL 308
GA + K T VAL
Sbjct: 122 GAAMGVKRGT-VAL 134
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +3
Query: 87 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL 266
K LR G V + K + + + A DV P++++ LPA+C + G+PY ++ L
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADL 121
Query: 267 GALVHRKTCTSVAL 308
GA + K T VAL
Sbjct: 122 GAAMGVKRGT-VAL 134
>M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal
degeneration C protein protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 90 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 191
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p
protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 90 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 191
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA,
isoform A protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 90 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 191
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD,
isoform D protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 90 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 191
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC,
isoform C protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 90 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 191
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB,
isoform B protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 90 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 191
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AY122076-1|AAM52588.1| 921|Drosophila melanogaster AT18175p
protein.
Length = 921
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 485 SVLSHAPSPSPAWRYARSTCYRGRH 411
+ L +AP S WRY R +RGRH
Sbjct: 327 ATLGNAPQVSSTWRYGRPGTHRGRH 351
>AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA
protein.
Length = 1364
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 485 SVLSHAPSPSPAWRYARSTCYRGRH 411
+ L +AP S WRY R +RGRH
Sbjct: 327 ATLGNAPQVSSTWRYGRPGTHRGRH 351
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 111 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 269
G + K ++K++A L ++A D + ALC + +P V +LG
Sbjct: 53 GIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLG 105
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 111 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 269
G + K ++K++A L ++A D + ALC + +P V +LG
Sbjct: 41 GIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLG 93
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 111 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 269
G + K ++K++A L ++A D + ALC + +P V +LG
Sbjct: 41 GIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLG 93
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 111 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 269
G + K ++K++A L ++A D + ALC + +P V +LG
Sbjct: 41 GIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLG 93
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,849,080
Number of Sequences: 53049
Number of extensions: 455172
Number of successful extensions: 1191
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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